Devosia oryziradicis: JI749_03305
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Entry
JI749_03305 CDS
T09885
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
doy
Devosia oryziradicis
Pathway
doy02024
Quorum sensing
doy03060
Protein export
doy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
doy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
JI749_03305 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JI749_03305 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JI749_03305 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
doy02044
]
JI749_03305 (ffh)
Enzymes [BR:
doy01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
JI749_03305 (ffh)
Secretion system [BR:
doy02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
JI749_03305 (ffh)
Eukaryotic Sec-SRP protein
JI749_03305 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_33
AAA_19
AAA_22
AAA_30
ResIII
AAA_31
Thymidylate_kin
APS_kinase
NACHT
AAA_14
TctA
AAA_16
DnaB_C
ABC_tran
AAA_5
NPHP3_N
ArsA_ATPase
ATPase_2
AAA_7
6PF2K
Motif
Other DBs
NCBI-ProteinID:
QQR36674
UniProt:
A0ABX7C066
LinkDB
All DBs
Position
660993..662582
Genome browser
AA seq
529 aa
AA seq
DB search
MFESLSDRLGKIFDGLRGRGALNAADVDAAMREIRRALIEADVSLEVVRAFVEQVKERAV
GAEVTRSVTPGQQVVKIVHDELVAVLGDTASPIDLNAKAPVTLLMVGLQGSGKTTTTAKI
AKRLKDRQKKKVLLASLDTRRPAAMEQLRVLGEQVGVDTLPIVASENPVQIARRAEREGR
LGGYDVLILDTAGRTHIDEELMAETAEIKSIANPHEILLVVDALTGQDAINVARSFDSRL
DVTGIVMTRVDGDGRGGAALSMRAATGKPIKLIGVGEKMDALEDFHPSRIADRILGMGDI
VSLVEKAAEHVSAEDAQKMAKKLKKGSFDLEDLRAQLIQMKKMGGMGGLMAMMPGVGQLK
KAMAGANVDEKVFDRQIAIINSMTKKERANPDLLNASRRKRIAAGAGVEVSEINKLAKQH
RQMADMMKKVGKGGMGALGGMFGGKMGNMLGGMPDLSKMDPAQLEQMARQAGIDPSALKG
LPSADLPAPKALPSDVGALLKSSGSPLLPGLGGGGAPRFPGLPGLGKKK
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagagcctttcagaccggcttggcaaaatcttcgacggactccgcggtcgcggc
gcgctcaatgcggccgacgtcgatgcagcgatgcgcgaaattcgccgcgcgctgatcgaa
gccgacgtgtcgctcgaagtggttcgggcctttgtcgagcaggtcaaggagcgcgccgtc
ggcgccgaggtcacccgctcggtgacgcctggccagcaggtggtcaagatcgtccatgac
gagctggttgccgttctcggcgatacggcctcgccgatcgacctcaatgccaaggcgccc
gtgaccctcctgatggtgggcctgcagggttcgggcaagacgacaactaccgccaagatc
gccaaacggctcaaggaccggcagaagaaaaaggttctgctggcctcgctcgatacccgc
cgtccggcggccatggagcagttgcgggtgctgggcgagcaggttggcgtcgataccctg
ccgattgtcgcctcggaaaatccggtccagatcgcgcgccgcgccgagcgcgaggggcgc
ctgggcggctatgacgtgctgatcctggatacggccggccgtacccatatcgacgaagag
ctgatggccgaaacggccgagatcaagtcgatcgccaatccgcatgaaatcctcctggtg
gtcgatgcactgaccggccaggacgcaatcaatgtcgcccgcagcttcgacagtcgcctc
gatgtcaccggcatcgtgatgacccgcgtcgatggcgatggccgtggcggcgccgcgctg
tccatgcgcgccgcgaccggcaagccgatcaagctgatcggcgtcggtgaaaagatggat
gcgctcgaggatttccatcccagccgcattgccgaccgtatcctgggcatgggcgacatc
gtttcgctcgtcgagaaggccgccgagcacgtctctgccgaagacgcgcagaagatggcc
aagaagctcaagaagggctccttcgacctcgaagacctgcgcgcccagctcatccagatg
aagaagatgggcggcatgggcgggctgatggcgatgatgcccggtgtcggccagctgaag
aaggcgatggccggggccaatgtcgacgagaaggtgttcgatcggcagatcgccatcatc
aattcgatgaccaagaaggagcgggccaatccggacctgctcaatgcatcgcgccgcaag
cgcattgccgccggcgcaggtgtcgaggtcagcgagatcaataagctggccaagcaacac
cgccagatggccgacatgatgaagaaggtcggcaagggtggcatgggtgcccttggtggc
atgttcggcggcaagatgggcaatatgctgggtggcatgcccgacctttccaagatggat
ccggctcagctcgaacagatggcacgccaggcgggcatcgatccatccgcgctcaagggc
ctgccctcggccgacctgcccgcgcccaaggcgctgccgtccgatgtcggcgcgctgctc
aaaagttccggttcaccgctgctgcccggcctgggcggcggtggcgccccccgtttcccc
ggccttcccggcctgggcaagaagaaatag
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