Devosia oryziradicis: JI749_05545
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Entry
JI749_05545 CDS
T09885
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
doy
Devosia oryziradicis
Brite
KEGG Orthology (KO) [BR:
doy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
doy01002
]
JI749_05545
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
doy01011
]
JI749_05545
Peptidases and inhibitors [BR:
doy01002
]
Cysteine peptidases
Family C82
JI749_05545
Peptidoglycan biosynthesis and degradation proteins [BR:
doy01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
JI749_05545
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
QQR37080
LinkDB
All DBs
Position
complement(1097411..1099108)
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AA seq
565 aa
AA seq
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MNKTLICLVAAFAGIGGVPSVLAQDVASLALSPVIIAPPQTPLAQTIKSGLGAVYYGSAK
DSAAYLEAQKLYFFYGNRHFEPIWLDEGANGEVTFSEPARKILKLFESAASEGLRPSDYL
TPDLDPAGAKGDPIKMAALETAFSGAALRYASHIYNGRIKPQSVSVLLDIAPKPLDTTAL
LVELASSPDPVAVLAALEPTHPEFLALKAALATFDDANLDRPIQVAEGPTLRPGMSDPRV
PALRDRLGIPAQDGLVYDDALVDAMKAFQGTLDLDVDGIMGPATLAALNGGVPVTRADII
ANMERWRWMPRELGAFNVVVNIPEFRLVINRDGAEEYTTRVVVGTTKNQTPVFSDNIRHI
VVNPYWNVPSSILRGEVAPAVMRNPGYVENQNMDLLYNGSPISPWQVDWSQVSSSNFPFR
VRQRPGPGNALGQIKFLFPNKHDVYLHDTPSKSLFARSFRAYSHGCVRVQNPMEFADALM
ANEPNISRASLEAMFGSTERWVNPDHQIPVHITYFTIRVEADGTLKSYGDVYGHNAKLIA
AMDLVQPEIAPEIVAEAEPVVELSP
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaccctgatctgccttgtcgccgcctttgccggcattggcggtgtgccatcc
gtactggcgcaggatgtcgccagcctggccttgagcccagtcatcatcgctccaccccag
accccgctggcacagaccatcaagtcaggtctgggcgccgtctactacggctcggccaag
gacagcgcggcctatctcgaggcacagaagctctatttcttctatggcaaccggcatttc
gagcccatctggctggacgaaggcgccaatggcgaagtcaccttctccgaacccgcccgc
aagatcctcaagctcttcgagagcgcggccagcgaagggcttcgcccgtctgactatctg
acgcccgatcttgatccggccggcgccaagggcgacccgatcaagatggccgcgctcgaa
accgccttctccggcgccgcgctgcgctatgccagccacatctataatggccgcatcaag
ccgcaatcggtcagcgtgctgctcgacatcgcgcccaagccgctcgataccaccgcgctt
ctggtcgagctcgcctcgagccccgatccggttgccgttctggctgcgctcgagccgaca
caccccgaattcctggccctcaaggccgcgctggcgacgttcgacgacgccaatctcgat
cgcccaatccaggtggccgaaggcccgacccttcggccgggcatgagcgatccgcgcgtc
cccgccctgcgtgaccgtctcggcattcccgcgcaggatggcctcgtctatgacgacgcg
ctcgtcgatgccatgaaggccttccagggtacgctcgatctggacgtcgacggcatcatg
gggcccgcgacgctggcagcgctcaatggcggcgtgccggtgacgcgcgccgacatcatt
gccaatatggagcgctggcgctggatgccgcgcgagctgggcgccttcaacgtcgtcgtc
aacattcccgaattccgcctggtcatcaaccgcgacggcgccgaggaatataccacccgc
gtcgtggtcggcacgaccaagaaccagacgccggtcttctcggacaatatccgccacatc
gtggtgaacccctactggaacgtgcccagctcgatcctgcgcggcgaagtggcgccggcc
gtgatgcgcaaccctggctatgtcgaaaaccagaacatggacctgctctataacggctcc
ccgatcagtccctggcaggtcgactggagccaggtttcgagcagcaatttcccgttccgc
gtgcgccagcgcccggggccgggcaatgcgctgggccagatcaagttcctgttccccaac
aagcacgacgtctatctgcacgacacgccgtccaagtcgctgttcgcccgctccttccgc
gcctatagccacggctgcgtccgcgtgcagaacccgatggaatttgccgatgcgctgatg
gccaacgagcccaacatttcgcgggcgtcgctggaggcgatgttcgggtccaccgagcgc
tgggtcaatccggaccatcagatcccggtgcacatcacctatttcaccatccgcgtagag
gccgacggaacgctgaagtcctatggcgacgtctacggccacaatgccaagctgatcgcc
gccatggatctggttcagcctgaaatcgcccccgaaatcgtggcggaagccgagccggtc
gtcgagctgtcgccttga
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