Devosia oryziradicis: JI749_07165
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Entry
JI749_07165 CDS
T09885
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
doy
Devosia oryziradicis
Pathway
doy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
doy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JI749_07165
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
doy02000
]
JI749_07165
Transporters [BR:
doy02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
JI749_07165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_1
SBP_bac_11
PGM_PMM_I
Motif
Other DBs
NCBI-ProteinID:
QQR37381
LinkDB
All DBs
Position
complement(1427519..1428625)
Genome browser
AA seq
368 aa
AA seq
DB search
MSIKKTLGASVSVLAVLAVSAPAFAQTDIDALYEAAKAEGQLTTIALPHSWCGYGDVIEG
FKAKYPGITVNELNPDAGSADEIEAIKANKGNTGPQAPDVIDVGLSFGPSAKAEGLIQPY
KVATWDSIPAEAKDEEGYWYGDYYGVMAMLVNKDLVSTVPADWADLLKPEYSASVGLAGD
PRASNQAIQAVYAAGLSSTGADEGAADAGLKFFADLNAAGNFVPVIGKAASVAQGTTPIL
LAWDYNLLSFRDGFAGNPETEIVVPATGVVAGVYIQAISAYAPHPNAAKLWMEYLYSDEG
QLGWLKGYCHPIRFNDLAANGKIPQELLDALPPAAAYEAAVFPSIDQQNAAKATITGQWD
AVVGANVE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcaagaaaaccctcggcgcatccgtctcggtgcttgccgtcctcgccgtttct
gcccccgctttcgcccagaccgacattgacgcgctctacgaagccgccaaggccgaaggc
cagctcaccaccatcgccctgccccactcctggtgcggctatggcgacgtgatcgaaggc
ttcaaggccaagtatccgggcatcaccgtcaacgaactcaaccccgatgccggctcggcc
gacgagatcgaagccatcaaggccaacaagggcaataccggcccgcaggcccccgacgtg
atcgacgtcggcctcagcttcggcccttcggccaaggccgaaggcctgatccagccctac
aaggtcgcgacctgggactccatccccgccgaggccaaggatgaagagggctactggtac
ggcgactactacggcgtgatggccatgctggtgaacaaggatctggtatccaccgttccc
gccgactgggctgacctgctcaagccagaatatagcgccagcgtcggcctcgccggtgat
ccgcgcgcctccaaccaggccatccaggccgtctatgccgccggtctctcctcgaccggt
gccgacgaaggcgctgccgatgccggcctcaagttcttcgccgacctcaatgctgccggt
aacttcgtcccggtcatcggcaaggctgcctcggtcgcccagggcacgacgccgatcctg
ctcgcctgggactacaatctgctctccttccgtgatggcttcgccggcaacccggaaacc
gagatcgtggtccccgccaccggcgttgtcgccggcgtctacatccaggccatctcggcc
tacgcaccccaccccaacgctgccaagctttggatggaatatctctattccgacgaaggt
cagcttggttggctgaagggctattgccacccgatccgcttcaacgacctggctgccaac
ggcaagatcccgcaggaactgctcgacgctctcccgccggccgccgcctatgaggctgcc
gtcttcccgagcatcgaccagcagaacgctgccaaggccaccatcaccggccagtgggac
gccgtcgtcggcgccaacgtcgagtaa
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