Devosia oryziradicis: JI749_07510
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Entry
JI749_07510 CDS
T09885
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
doy
Devosia oryziradicis
Pathway
doy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
doy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JI749_07510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
doy03019
]
JI749_07510
Enzymes [BR:
doy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
JI749_07510
Messenger RNA biogenesis [BR:
doy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JI749_07510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
QQR37447
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All DBs
Position
1499274..1500449
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AA seq
391 aa
AA seq
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MSDDPILEADWLKNPETQAILAALDGAERRTRIVGGVIRDTIMDVKRASADIDMATELLP
DEVMARAKAAGMASYPTGIEHGTVTLKLGETIAEVTTLRRDVETDGRHAVVAFGTDWVED
ASRRDFTLNALYCDADGTLFDPLDGVGDALSGVVRFIGDASQRIAEDGLRVYRFFRFSAS
HGGQQFDVGGLAACADAAGRLEHLSRERVGAEMTRMLALPKVAGTLTEMADIGLFKADDD
ALAALGAYEAIGGQSVAARLALLADGRFEQVQDEWRLGNALVKEATGIAAAAEILADERI
GEAAYRHGELAIEGLAVAASRGGWSRARLAEVARMLAATVVPDFPISGHDLAGLGLIPGP
ALGQELARLERAWLESGFALRKAELLALVGR
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgatccgatcctcgaggccgactggctcaaaaatccagagacgcaggcgatt
ctggcggcgctcgatggcgcggaacggcgcacccggatcgtgggtggggtcattcgcgat
acgatcatggacgtgaagcgggccagcgccgatatcgacatggcgaccgagttgctgccc
gacgaagtgatggcccgcgccaaggcagcgggaatggcgagttatcccaccggcatcgag
catggcacggtgacgcttaaactgggcgagaccattgccgaggtcacgacgctacggcgg
gatgtggaaaccgatggccgccacgccgtcgtggccttcggtaccgactgggttgaggat
gccagccgccgggatttcaccctcaacgcgctctattgcgatgccgatggcaccctgttc
gatccgctcgacggggtcggcgatgctctatcgggtgtggtgcgcttcatcggcgacgcc
agtcaacggatcgccgaggacgggctgcgggtttatcgattcttccgcttttccgcgagc
cacggcggccagcagtttgacgttggagggctcgccgcctgcgccgatgcggcggggcgg
ctggagcatctgtcacgcgagcgcgtcggcgccgaaatgacgcgcatgctggcgctgccc
aaggttgccgggacgttgactgaaatggccgatatcggcctcttcaaagccgatgatgac
gccttggcggccctgggtgcctacgaggccattggtggccagtcggttgccgcacggctg
gcgctattggcagacgggcggttcgagcaggtgcaggacgagtggcgcctcggcaacgct
ttggtcaaggaagcaacgggcatcgcagcggcggcggaaatcctggccgacgaacgcatc
ggcgaggcggcgtatcgccatggcgaactggccatcgagggcctggccgtcgccgcgtct
cgcggcggctggagccgggcgcggctggccgaggtggcgcgtatgctggcggccacggtg
gttcccgactttccgatcagcggacacgaccttgccggcctcggcttgataccgggaccg
gcccttggtcaggaattggcccgtcttgagcgggcctggctcgagagcggctttgctctc
aggaaagccgagctactggcgctcgtggggcgctag
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