Devosia oryziradicis: JI749_09020
Help
Entry
JI749_09020 CDS
T09885
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
doy
Devosia oryziradicis
Pathway
doy03420
Nucleotide excision repair
doy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
doy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JI749_09020
03430 Mismatch repair
JI749_09020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
doy03400
]
JI749_09020
Enzymes [BR:
doy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JI749_09020
DNA repair and recombination proteins [BR:
doy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JI749_09020
MMR (mismatch excision repair)
Other MMR factors
JI749_09020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QQR34536
LinkDB
All DBs
Position
complement(1798980..1801325)
Genome browser
AA seq
781 aa
AA seq
DB search
MPGNAHNIDRPSAGAITGQFGRNQQTPDYLRGLNEEQREAVLSTDGPLLVLAGAGTGKTR
VLTTRIAHILTTKRAWPSEILSVTFTNKAAREMKERIGHLVGAGVEGMPWLGTFHSIGAR
ILRRHAELVDLKSDFTILDTDDQIRLIKQLLDAENIDEKRWPARQLAGMMDTWKNRGLGP
EDVSPADSGSYANGRGARLYAAYQNRLKVLNAADFGDLLLLNIKIFKEYPDVLAYYHGKF
KYMLVDEYQDSNVAQYLWLRLLAQGKPASQANICVVGDDDQSIYGWRGAEVDNILRFEKD
FPGAKVIKLERNYRSTSNILKAASTLIAFNEGRLGKTLQTDVGETGEPVSVTSVWDSEEE
ARTVGDEIENYQRQGETLNSMAILVRASFQMREFEERFITLGLNYRVIGGPRFYERKEIR
DAIAYLRVVANPSDGLSFERIVNTPKRGLGDSTVQMLHNTSRSANVSLLAATRMLLETEE
LKPKQRSTLRELVSQFDNWSSRLQSLPHYELAEQILDESGYTAMWQADKSPDSPGRLENL
KELVRSMEEFETLGGFLEHISLVMDRDTAEAEDAVSIMTLHSAKGLEFDTVFLPGWEEGL
FPSQRTMDESGRAGLEEERRLAYVGITRARKRARLSVAQNRRIHGLWQSAIPSRFLDELP
PEAVDVKDTGSSYGGYGYGGGATSRFNKADPFESVYETPGWQRARAQQSNRKGGGPLTIE
GDLVARSVDLGGDRSAFGIGERVFHLKFGYGAISDIEGNKLTIDFEKAGRKKVLESFIKK
G
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcaatgcccacaacatcgaccgcccgtcagccggcgcgatcaccggtcaattc
ggccgcaaccagcagacgcccgattacctgcgcgggctcaatgaagaacagcgcgaagcc
gtgctgagtaccgacggcccgctgctggtgctggccggcgctggcacaggcaagacccgc
gttctcactacgcggatcgcccacatcctcaccaccaagcgcgcctggccatccgaaatc
ctgtcggtgaccttcaccaacaaggccgcgcgcgaaatgaaagagcgtatcggccatctg
gtcggggccggcgtcgagggcatgccttggctgggcaccttccactccatcggcgcacgc
atcctgcgtcgccatgccgagctggtcgacctcaagtccgatttcaccattctggatacc
gacgaccagatccgtctcatcaagcagttgctcgacgctgagaacatcgacgaaaagcgc
tggccggcccgccagttagccgggatgatggacacctggaaaaatcgcggcctcggcccc
gaggatgtttcgcccgccgacagtggctcctatgccaacggtcgcggcgcgcggctctac
gccgcctaccagaaccggctcaaggtgctgaacgctgccgatttcggcgacctgctgctg
ctcaacatcaagatattcaaggaatatccggacgttctggcctactaccacggcaaattc
aaatacatgctggttgacgaatatcaggacagcaacgtcgcccagtatctctggctgcgt
ctgctagcccagggcaagccggccagccaagccaacatctgcgtggtcggcgacgacgac
cagtccatctatggctggcgcggcgccgaggtcgacaacatcctgcgcttcgaaaaggac
tttccgggcgccaaggtgatcaagctcgagcgcaattatcgctcgacctcgaacatcctc
aaggcggcatcgacgctgatcgccttcaacgagggtcgtctcggcaagacgctgcagacc
gacgtcggcgaaactggcgagccggtttccgtcacttcggtgtgggacagcgaggaagaa
gcccgcaccgtcggcgacgagatcgaaaactaccagcgccagggcgaaaccctcaattcc
atggccatcctggtccgcgcctcgttccagatgcgcgaattcgaagagcgcttcatcacg
ctaggtctcaactatcgcgtcatcggcggtccgcgcttctacgagcgcaaggaaatccgc
gacgccatcgcctatctgcgcgtggtcgccaatccgtccgacggcctctccttcgagcgc
atcgtcaacacgcccaagcgcggcttgggcgacagcacggtccagatgctgcacaacacg
tcgcgttcggccaacgtgtcgctactcgctgcaacacgcatgctgctcgaaaccgaagag
ctcaagcccaagcagcgcagcacattgcgtgagctggttagtcagttcgacaactggtcg
agccgcctccagtccctgccccactatgagctggccgagcagatcctcgacgagagcggc
tataccgccatgtggcaggccgacaaatctcccgactcgcccgggcggctggaaaatctc
aaggaactcgttcgctccatggaagagttcgagacgctcggcggcttcctcgaacacatc
tcgctggtcatggaccgcgacactgccgaagccgaagacgccgtctccatcatgacgctg
cactcggccaagggcctggaattcgacaccgtcttcctccccggttgggaagagggtctg
ttcccgagccagcgcaccatggacgagagtggccgcgccgggctcgaggaggagcggcgg
ctggcttatgtcggcatcacccgcgcccgcaagcgtgcacgtctctcggtagcgcagaac
cgccgcatccatggcctctggcaatcggctatcccgtcgcgcttcctcgacgagctcccg
cccgaggcggtcgacgtcaaggacaccgggtcgtcctatgggggctacggctatggcggc
ggtgccacctcccgcttcaacaaggctgacccgttcgaaagcgtctatgaaaccccgggc
tggcagcgcgcccgcgcccagcagtcgaaccgaaagggcggtggcccgttgacgatcgaa
ggtgacctggtggcgcgctcggtcgatctgggcggcgatcgctcggccttcggcatcggc
gagcgcgtcttccatctcaagttcggctacggcgccatatcggatatcgaaggcaacaaa
ctgaccatcgatttcgagaaagccggccgcaagaaggtgctggagagctttatcaagaag
gggtaa
DBGET
integrated database retrieval system
