Devosia oryziradicis: JI749_09265
Help
Entry
JI749_09265 CDS
T09885
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
doy
Devosia oryziradicis
Pathway
doy00260
Glycine, serine and threonine metabolism
doy00460
Cyanoamino acid metabolism
doy00630
Glyoxylate and dicarboxylate metabolism
doy00670
One carbon pool by folate
doy00680
Methane metabolism
doy01100
Metabolic pathways
doy01110
Biosynthesis of secondary metabolites
doy01120
Microbial metabolism in diverse environments
doy01200
Carbon metabolism
doy01230
Biosynthesis of amino acids
doy01240
Biosynthesis of cofactors
doy04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
doy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JI749_09265
09102 Energy metabolism
00680 Methane metabolism
JI749_09265
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JI749_09265
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JI749_09265
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JI749_09265
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JI749_09265
Enzymes [BR:
doy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JI749_09265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QQR34580
LinkDB
All DBs
Position
complement(1847449..1848717)
Genome browser
AA seq
422 aa
AA seq
DB search
MLHTKTPGGLTDLAVAASIDRELGRQQNQIELIASENIVSRNVLLAQGSVLTNKYAEGYP
GKRYYGGCEFVDEVETIAIERAKELFGAAYANVQPHSGAQANQAVYFALLQPGDRIMGMS
LAHGGHLTHGSPVTMSGKWFEVSSYQVREDNQLIDYDQVRAVALETQPKLIVAGASAYPR
AIDFAFFRKVADEVGAYLMVDMAHYAGLVAAGVYPDPMPHAHVVTTTTHKTLRGPRGGMI
LTNGEALAKKFNSAVFPGNQGGPLMHVIAAKAVAFGEALDPSFKIYAQDVVANARALAET
LIAGGLNIVSGGTDSHMVLVDLRPKGVKGRDAEHALERAGLTCNKNAIPFDPEKPAVTSG
VRLGTSAGTTRGFGQEEFKRVGELILQVVDALALAGPEGDAAVEKAVLAEVQDICVRFPI
YQ
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcttcacaccaagacgccgggcggcctgaccgaccttgccgttgccgcttcgatcgac
cgcgagctgggccgccagcagaaccagatcgagctcatcgcttcggaaaacatcgtgtcc
cgtaatgtgctgctggcacagggttcggtgctgaccaacaagtatgccgagggttatccc
ggcaagcgctactatggcggctgcgagttcgtcgacgaggtcgaaactatcgccatcgaa
cgggccaaggagctgttcggggcggcctatgccaatgtccagccccattcgggcgctcag
gctaaccaggccgtctacttcgccctgctccagccgggcgaccggatcatgggcatgtcg
ctggcccatggcggccacctgacccatggctcgcctgtcaccatgtcgggcaagtggttc
gaggtgtcgagctaccaggtgcgcgaagacaaccagctgatcgactacgatcaggtccgt
gcggtggcgctcgaaacacagcctaagctgatcgtcgccggagcttcggcctatccgcgc
gccatcgacttcgccttcttccgcaaggtggcggacgaagtgggtgcctatctcatggtc
gacatggcccactatgcgggcctcgtcgctgcaggcgtctatcccgacccgatgccgcat
gctcatgtcgtcacgaccacgacgcacaagaccctgcgcggtccgcgtggcggcatgatc
ctcaccaatggcgaggccctggccaagaagttcaactcggccgtgttcccgggcaaccag
ggtggcccgctgatgcatgtcatcgccgccaaggcggtggcgttcggcgaagcgctcgac
ccaagcttcaaaatctacgcccaggacgtcgtcgccaatgcgcgggctctcgccgagacg
ctgatcgctggcgggctcaatatcgtctctggcggcactgacagccacatggttctcgtc
gacctccgccccaagggcgtcaagggccgcgatgccgaacatgcgctcgaacgcgccggg
ctgacctgcaacaagaacgccattccgttcgatccggaaaagccggcggtcacctcgggt
gtgcgcctgggcacctcggccggcacgacgcgcggcttcggccaggaggaattcaagcgc
gtgggcgaactgatcctccaggtcgtcgatgcactggccttagccggccccgaaggtgac
gctgcggttgaaaaggctgtcctggccgaagtccaggacatctgcgtccgctttcccatc
taccagtaa
DBGET
integrated database retrieval system