Devosia oryziradicis: JI749_09705
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Entry
JI749_09705 CDS
T09885
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
doy
Devosia oryziradicis
Pathway
doy00550
Peptidoglycan biosynthesis
doy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
doy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JI749_09705 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
doy01003
]
JI749_09705 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
doy01011
]
JI749_09705 (pbpC)
Enzymes [BR:
doy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
JI749_09705 (pbpC)
Glycosyltransferases [BR:
doy01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
JI749_09705 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
doy01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
JI749_09705 (pbpC)
BRITE hierarchy
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
QQR34666
LinkDB
All DBs
Position
1950947..1953061
Genome browser
AA seq
704 aa
AA seq
DB search
MSTDQPKPFFWTRWLTLTGFSIFVLACAGAIQLSSAITTIWATLPPTPDVATLPVSVAVT
DRDGLLLRPFTTADGRWRLPVEQAAIDPRFIKMLIAYEDRGFAEHDGIAWSSMFRAAGQF
IGAGGRVVSGGSTLTMQVARLIEGEPTRNLWGKLRQMVHADRLEHDLSKDQILHLYLTLA
PYGGNIEGIRAASLAYFGKEPTRLTTAEAALLVALPQSPEARRPDRDPVAAQRSRDMVLD
RLVAMGALLAEDAAAAKREPVPTARREFPMLAAHMAEQAVKAQPAARAVRLTIDKRLQDA
LEHLAAGRARLIDPRVSVAIVAADIKSGEVLASVGSAGLLNSDSAGFVDMTNAVRSPGST
LKPLIYGLAFELGLAHPESLIEDRPTAFGAYVPVNFDGFSRGTVTIHDALTESLNIPAVV
VLDAVGPARLVSRLRRAHADPRLPVDTAPSLAVGLGGVGITLRDLVSVYAAIGNGGTPVR
LYDGVGPKPAAEIAAPVLDPVSAWYVSDILADVPPPLNGSPGRIAYKTGTSYGYRDGWAI
GFDGKTVVGVWVGRPDGAPVPGLSGIVGAAPILFEAFDRLGDRKAPLPRAPQGAVLASNT
ELPTPLRRFRHPDEDMVARVAAPEIAFPGNGVDVDLGLTGGDASPLMVKVRNGVPPFIFF
ANGAPFGRPEFARQSLWTPDGPGYVTLSVVDAEGRADTVTVFLN
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgatcagcccaaacccttcttttggacccgctggctgaccctcacgggcttc
agcatctttgttctcgcctgcgccggagccatccagctcagctcggcgataaccaccatc
tgggccacgctgccgccgacgcccgacgtcgcgacgctgccggtttccgtcgccgtcacc
gaccgcgacggtttgctgctccgacccttcaccacagccgacggccgctggcgcctgcca
gtcgagcaggctgccatcgatccgcgcttcatcaagatgctgatcgcctatgaggatcgc
ggttttgccgagcatgacggcattgcctggagctcgatgtttcgcgcggcggggcagttc
atcggcgctggcgggcgcgtcgtttctggcggatcgacgctgaccatgcaggtggcccgc
ctgatcgaaggcgagccgacgcgtaacctctggggcaagctgcgccagatggtgcatgcc
gaccggctggagcacgatctgagcaaggaccagatcctccatctctacctgacgctggcg
ccttacggcggcaatatcgagggcattcgtgcggccagcctcgcctatttcggcaaggag
ccgacgcggttgaccaccgccgaggcggcgctcctcgtggccttgccccaatcgcccgag
gcgcgccggcctgatcgtgatccggtggccgcgcagcgcagccgcgacatggtgctcgac
cgcctcgtggcgatgggagcactgctggcggaggacgctgcggccgccaagcgcgagccg
gtgccaacggcgcggcgcgaattccccatgctggccgcccacatggccgagcaggcggtc
aaggcgcagcccgcggcgcgcgcggtacggctcaccatcgacaagcgattgcaggacgcg
ctggagcacctcgccgccggtcgcgcgcggttgatcgaccccagggtgtcggtggctatc
gtcgccgccgatataaaaagcggcgaggttcttgcctcggtggggtcggcaggtttgctc
aacagcgacagcgctggctttgtcgacatgaccaacgccgtccgttcgcccgggtcgacc
cttaagcccttgatctatggcctggccttcgagcttggcctggcgcatcccgaaagcctg
atcgaagatcggcccactgccttcggcgcttatgtccccgtcaacttcgacggcttcagt
cgtggcaccgtcaccatccacgatgccctcaccgagtcgctgaacattcccgcagttgtg
gtgctcgacgcggtcgggccggcgcggctggtgtcacgcctgcgccgggcccatgccgat
ccgcggctgccggtcgataccgcgcccagcctggcggttggcctgggcggcgtcggcatc
accctgcgcgacctggtatcggtctatgcggcgatcggcaatggcggcacgcccgtccgg
ctttatgacggggtcgggcccaagccggcggctgagatagcggcgccggtgctcgatcct
gtgtcggcctggtatgtgtccgatatcctggccgatgtgccgccgccgcttaatggctcg
ccgggccgcatcgcctacaagaccggcacgtcctatggttatcgcgatggctgggccatt
ggctttgatggcaagacggtcgtcggcgtctgggtcggccggcccgatggtgctcccgtg
cctggtctttcgggcattgtcggagcagcacctatcctcttcgaggccttcgatcgcctc
ggcgaccgcaaggcgccgctgccgcgtgcgccccagggagccgtgctggcgtccaacacc
gagctgcccacgcccctccgccgcttccgtcaccccgatgaagacatggtggcccgcgtt
gctgcccccgagatcgcctttcccggcaatggcgtcgatgtggacctcgggctgaccggc
ggcgacgcatcgccgctgatggtcaaggtgcgcaacggcgtgccgccgttcattttcttt
gccaacggcgccccctttggccgccccgaatttgcccgccagagcctgtggacgccggat
gggccgggttatgtcacgctttcggtggtcgatgccgagggcagggccgacacggtgacg
gtgttcttgaattga
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