Devosia oryziradicis: JI749_11540
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Entry
JI749_11540 CDS
T09885
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
doy
Devosia oryziradicis
Pathway
doy00010
Glycolysis / Gluconeogenesis
doy00020
Citrate cycle (TCA cycle)
doy00260
Glycine, serine and threonine metabolism
doy00280
Valine, leucine and isoleucine degradation
doy00310
Lysine degradation
doy00380
Tryptophan metabolism
doy00620
Pyruvate metabolism
doy00630
Glyoxylate and dicarboxylate metabolism
doy00640
Propanoate metabolism
doy00670
One carbon pool by folate
doy00785
Lipoic acid metabolism
doy01100
Metabolic pathways
doy01110
Biosynthesis of secondary metabolites
doy01120
Microbial metabolism in diverse environments
doy01200
Carbon metabolism
doy01210
2-Oxocarboxylic acid metabolism
doy01240
Biosynthesis of cofactors
Module
doy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
doy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
doy_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
doy_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
doy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
JI749_11540 (lpdA)
00020 Citrate cycle (TCA cycle)
JI749_11540 (lpdA)
00620 Pyruvate metabolism
JI749_11540 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
JI749_11540 (lpdA)
00640 Propanoate metabolism
JI749_11540 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JI749_11540 (lpdA)
00280 Valine, leucine and isoleucine degradation
JI749_11540 (lpdA)
00310 Lysine degradation
JI749_11540 (lpdA)
00380 Tryptophan metabolism
JI749_11540 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JI749_11540 (lpdA)
00670 One carbon pool by folate
JI749_11540 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
doy04147
]
JI749_11540 (lpdA)
Enzymes [BR:
doy01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
JI749_11540 (lpdA)
Exosome [BR:
doy04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
JI749_11540 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
HI0933_like
NAD_binding_8
FAD_binding_2
GIDA
FAD_binding_3
Lys_Orn_oxgnase
AlaDh_PNT_C
2-Hacid_dh_C
DAO
Trp_halogenase
DUF4831
Thi4
Lycopene_cycl
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
QQR35008
UniProt:
A0ABX7BTX3
LinkDB
All DBs
Position
complement(2301819..2303258)
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AA seq
479 aa
AA seq
DB search
MADQYDLLVIGAGPGGYVAAIRGAQLGMKVGIIEREHMAGICSNWGCIPTKALLRSAEIY
GHMSHAKDYGLTAETFGFDIDGVVKRSRAIAAQMNNGVQFLMKKNKVDIIWGEGVITKPG
EVKVAPTKKAIQQPQVPPPKNALGEGTYKAKNIIIATGARPRVLPGIEPDGDKIWTYFEA
MKPATMPKSLVVMGSGAIGVEFASFYRSMGAEVTIIELLPQIMPVEDSEIAALARKRLEK
RGIKILTDAKVAKVEKTKDGVVAHVETKDGKSQQIAGERLISAVGVQCNIEGLGLETVGV
KTERGAIVIDHYGATNVAGIWAIGDVAGPPMLAHKAEHEAVITVEKIAGMNVHGLDKTKV
PGCTYCEPQVASVGLTEAKAKEAGREIKVGRFPFVGNGKAIALGEPDGLVKTIFDAKTGE
LLGAHMVGAEVTELIQGFVVAMNLETTEEDLMHTIFPHPTLSETMKESVLDAYGRALNI
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccaatacgaccttctcgtcatcggcgccggccccggcggctatgttgccgcc
atccgtggcgcgcagctcggcatgaaggtgggcatcatcgagcgtgagcatatggcaggc
atctgctccaactggggctgcatcccgaccaaggcgctgctgcgctctgccgaaatctac
ggccacatgagccacgccaaggactacggcctgaccgccgagacgttcggctttgacatc
gacggggtcgtcaagcgttcacgcgccattgccgcgcagatgaacaacggcgtccagttc
ctgatgaagaagaacaaggtcgacatcatctggggcgagggtgtcatcaccaagccaggt
gaagtcaaggtggcgccgaccaagaaggccatccagcagcctcaggtgccgccgccgaag
aatgcgctgggcgaaggcacatacaaggcgaagaacatcatcatcgccaccggggcccgt
ccgcgcgtcctccccggcattgagcccgacggcgacaaaatctggacgtacttcgaggcc
atgaagccggccaccatgcccaaatcgctggtcgtgatgggctctggcgccataggcgtc
gagttcgcgtccttctaccgctcgatgggcgctgaagtgacaatcattgagctactgccg
cagatcatgccggtagaagactccgagatcgccgcccttgcccgcaagcggctcgagaag
cgcggaatcaagatcttgaccgatgccaaggtcgccaaggtcgaaaagaccaaggacggc
gtcgtcgcccatgtggagaccaaggatggcaaaagccagcagattgccggcgagaggctg
atctcggctgttggcgtgcagtgcaatatcgaaggccttggcctcgaaaccgtcggcgtc
aagaccgagcgcggcgccatcgtcatcgaccactatggcgcgaccaacgtcgccggcatc
tgggccatcggcgacgtcgctggtcccccaatgctggcgcacaaggccgagcacgaggcc
gtcatcacggtcgaaaagatcgctggcatgaacgtccacggcctcgacaagaccaaggtt
cccggctgcacctattgcgagccgcaggtcgcgtcggtcggccttacggaagccaaggcc
aaagaggcgggtcgcgagatcaaggtcggccgcttccccttcgtgggcaacggcaaggcg
atcgcccttggcgaaccggatggtctggtaaagaccatcttcgatgccaagaccggcgag
ttgctgggggcccacatggtaggcgccgaggtgaccgagcttatccagggtttcgtcgtt
gccatgaacctcgagaccaccgaggaagacctgatgcacaccattttcccgcatccgacg
ctgagcgaaacgatgaaggaaagcgttctggatgcctatggtcgcgcgctgaacatctag
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