KEGG   Devosia oryziradicis: JI749_11540
Entry
JI749_11540       CDS       T09885                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
doy  Devosia oryziradicis
Pathway
doy00010  Glycolysis / Gluconeogenesis
doy00020  Citrate cycle (TCA cycle)
doy00260  Glycine, serine and threonine metabolism
doy00280  Valine, leucine and isoleucine degradation
doy00310  Lysine degradation
doy00380  Tryptophan metabolism
doy00620  Pyruvate metabolism
doy00630  Glyoxylate and dicarboxylate metabolism
doy00640  Propanoate metabolism
doy00670  One carbon pool by folate
doy00785  Lipoic acid metabolism
doy01100  Metabolic pathways
doy01110  Biosynthesis of secondary metabolites
doy01120  Microbial metabolism in diverse environments
doy01200  Carbon metabolism
doy01210  2-Oxocarboxylic acid metabolism
doy01240  Biosynthesis of cofactors
Module
doy_M00009  Citrate cycle (TCA cycle, Krebs cycle)
doy_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
doy_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
doy_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:doy00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    JI749_11540 (lpdA)
   00020 Citrate cycle (TCA cycle)
    JI749_11540 (lpdA)
   00620 Pyruvate metabolism
    JI749_11540 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    JI749_11540 (lpdA)
   00640 Propanoate metabolism
    JI749_11540 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    JI749_11540 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    JI749_11540 (lpdA)
   00310 Lysine degradation
    JI749_11540 (lpdA)
   00380 Tryptophan metabolism
    JI749_11540 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    JI749_11540 (lpdA)
   00670 One carbon pool by folate
    JI749_11540 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:doy04147]
    JI749_11540 (lpdA)
Enzymes [BR:doy01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     JI749_11540 (lpdA)
Exosome [BR:doy04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   JI749_11540 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored HI0933_like NAD_binding_8 FAD_binding_2 GIDA FAD_binding_3 Lys_Orn_oxgnase AlaDh_PNT_C 2-Hacid_dh_C DAO Trp_halogenase DUF4831 Thi4 Lycopene_cycl 3HCDH_N
Other DBs
NCBI-ProteinID: QQR35008
UniProt: A0ABX7BTX3
LinkDB
Position
complement(2301819..2303258)
AA seq 479 aa
MADQYDLLVIGAGPGGYVAAIRGAQLGMKVGIIEREHMAGICSNWGCIPTKALLRSAEIY
GHMSHAKDYGLTAETFGFDIDGVVKRSRAIAAQMNNGVQFLMKKNKVDIIWGEGVITKPG
EVKVAPTKKAIQQPQVPPPKNALGEGTYKAKNIIIATGARPRVLPGIEPDGDKIWTYFEA
MKPATMPKSLVVMGSGAIGVEFASFYRSMGAEVTIIELLPQIMPVEDSEIAALARKRLEK
RGIKILTDAKVAKVEKTKDGVVAHVETKDGKSQQIAGERLISAVGVQCNIEGLGLETVGV
KTERGAIVIDHYGATNVAGIWAIGDVAGPPMLAHKAEHEAVITVEKIAGMNVHGLDKTKV
PGCTYCEPQVASVGLTEAKAKEAGREIKVGRFPFVGNGKAIALGEPDGLVKTIFDAKTGE
LLGAHMVGAEVTELIQGFVVAMNLETTEEDLMHTIFPHPTLSETMKESVLDAYGRALNI
NT seq 1440 nt   +upstreamnt  +downstreamnt
atggctgaccaatacgaccttctcgtcatcggcgccggccccggcggctatgttgccgcc
atccgtggcgcgcagctcggcatgaaggtgggcatcatcgagcgtgagcatatggcaggc
atctgctccaactggggctgcatcccgaccaaggcgctgctgcgctctgccgaaatctac
ggccacatgagccacgccaaggactacggcctgaccgccgagacgttcggctttgacatc
gacggggtcgtcaagcgttcacgcgccattgccgcgcagatgaacaacggcgtccagttc
ctgatgaagaagaacaaggtcgacatcatctggggcgagggtgtcatcaccaagccaggt
gaagtcaaggtggcgccgaccaagaaggccatccagcagcctcaggtgccgccgccgaag
aatgcgctgggcgaaggcacatacaaggcgaagaacatcatcatcgccaccggggcccgt
ccgcgcgtcctccccggcattgagcccgacggcgacaaaatctggacgtacttcgaggcc
atgaagccggccaccatgcccaaatcgctggtcgtgatgggctctggcgccataggcgtc
gagttcgcgtccttctaccgctcgatgggcgctgaagtgacaatcattgagctactgccg
cagatcatgccggtagaagactccgagatcgccgcccttgcccgcaagcggctcgagaag
cgcggaatcaagatcttgaccgatgccaaggtcgccaaggtcgaaaagaccaaggacggc
gtcgtcgcccatgtggagaccaaggatggcaaaagccagcagattgccggcgagaggctg
atctcggctgttggcgtgcagtgcaatatcgaaggccttggcctcgaaaccgtcggcgtc
aagaccgagcgcggcgccatcgtcatcgaccactatggcgcgaccaacgtcgccggcatc
tgggccatcggcgacgtcgctggtcccccaatgctggcgcacaaggccgagcacgaggcc
gtcatcacggtcgaaaagatcgctggcatgaacgtccacggcctcgacaagaccaaggtt
cccggctgcacctattgcgagccgcaggtcgcgtcggtcggccttacggaagccaaggcc
aaagaggcgggtcgcgagatcaaggtcggccgcttccccttcgtgggcaacggcaaggcg
atcgcccttggcgaaccggatggtctggtaaagaccatcttcgatgccaagaccggcgag
ttgctgggggcccacatggtaggcgccgaggtgaccgagcttatccagggtttcgtcgtt
gccatgaacctcgagaccaccgaggaagacctgatgcacaccattttcccgcatccgacg
ctgagcgaaacgatgaaggaaagcgttctggatgcctatggtcgcgcgctgaacatctag

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