Devosia oryziradicis: JI749_12775
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Entry
JI749_12775 CDS
T09885
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
doy
Devosia oryziradicis
Pathway
doy02024
Quorum sensing
doy03060
Protein export
doy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
doy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
JI749_12775 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JI749_12775 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JI749_12775 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
doy02044
]
JI749_12775 (secD)
Secretion system [BR:
doy02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
JI749_12775 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
Sterol-sensing
Motif
Other DBs
NCBI-ProteinID:
QQR35237
UniProt:
A0ABX7BUL4
LinkDB
All DBs
Position
complement(2546226..2548772)
Genome browser
AA seq
848 aa
AA seq
DB search
MQSSPIRTAIIALVAILGILFTIPSFLPQNVRDNWPGFLPRQTVVLGLDLQGGSHLLLQV
NESGIVTERLQSLRRDVRNTLANENGIGNLITTDEATKTLTVELTDPTQKEAARTAIAGL
QNTISNSLLAVGGVNELAFGETADGKLTVTLTPEGVEQRMSALVAQSIEVIRKRVDELGT
TEPSIQRQGTNRVLVQVPGFGDSQRLKDIISRTARLTFHMVYPGMTAAQAQAQGLPAGTM
ILPSQDGGSELLYEDIALGGESLVDAQPSYDQQRAMPVVSFKFDTRGAITFGQITGANVG
KRFAIVLDDQVITAPVIQQPITGGSGQISGNFTTSSANDLAVLLRAGALPASLDVVEERT
VDASLGADSIRNGLTAGVIAAVLVVAFMVAAYGLWGVFANVSLVLNIILIFGALSMLGAT
LTLPGIAGIVLTIGMAVDANVLIYERMREEQRAGKSAIQSIQAGFERAWGTIVDSHLTQL
IAAIVLYFLGSGPVQGFAVTLALGILTSLFTSYTVTSYQVHAWFRRVRPKTLKIQHFRFI
PDGTKIPFMKISRYVIAFSIVASLLSVGSAYFKGFNLGIDFVGGTAIVIQHEGGPADVGQ
VRELLDGLDLGEVQVQGFGTPEDVLVRVQAQEGGQDADQVAVTKVRDALATENYTIRSTE
AVSGTVSGELAWKGTIAVIVALGAILIYIWFRFEWQFALAAVVTTSHDIIMTIGLFSITG
LEFNLTSIAAVLTLVGLSLNETVVVSDRVRENLRKHRKMPLPELIDLSINQTIVRTSLTQ
FTVFLALIPLVLFGGEVIRSFTIAMTFGCLVGMYSSIIVNGPILINFGLKSKSEEDAAVA
KTADGASV
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttcgccgatccgtaccgccatcatcgccctcgtggccatcctgggcatcctg
ttcacgatccccagtttcctgccgcagaatgtgcgcgacaactggccgggcttcctgccc
aggcagacggtggttctcggtctcgacctgcagggcggctcgcatctgctgctgcaggtc
aacgaaagcggcatcgttaccgagcgcctgcagtcgttgcgccgcgatgtgcgcaatacg
ctggccaacgaaaacggcatcggcaacctgatcaccaccgacgaagcgaccaagacgctg
acggtcgaactgaccgatcctacccagaaggaagcagcgcgcacggccattgcgggcctg
cagaacaccatcagcaattcgctgctcgccgtgggcggcgtgaacgagctggctttcggc
gagacggccgacggcaagctgaccgtcacgctgacgccggaaggtgtcgagcagcgcatg
tcggcactggtggcgcagtcgatcgaagtgatccgcaagcgcgtcgacgaactgggcacg
accgaaccgtcgatccagcggcagggcaccaaccgcgtgctggtgcaggtgcctggcttt
ggcgacagccagcgactgaaggacatcatctcgcggacagcgcgcctgaccttccacatg
gtctatcccggcatgaccgccgcacaggcacaggcccagggcctgccggcaggcaccatg
atcctgcccagccaggatggcggctccgagctgctttatgaagacatcgccctgggcggc
gagtcgctggtggacgcacagccgagctatgaccagcagcgcgccatgcccgtggtcagc
ttcaagttcgatacgcgcggcgccatcaccttcggccagatcaccggcgccaatgtgggc
aagcgcttcgccatcgtgctcgacgaccaggtcatcacggcacccgttattcagcagccg
atcaccggcggctcgggccagatcagcggcaatttcaccacttcgtcggccaacgacctc
gcggtgctgctgcgtgccggcgccctgccggcttcgctcgatgtggtcgaggagcgcacg
gttgatgccagcctgggtgcggactctatccgcaatggcctcaccgccggcgtgattgcc
gccgtgctggtggtcgccttcatggtggctgcctatggcctgtggggtgtgttcgccaac
gtctcgctggtgctcaacatcatcctgattttcggcgccctttccatgctgggggccacg
ctgacgctgccgggcatcgcaggtatcgtgctgaccatcggcatggcggtggatgccaac
gtgctgatctatgagcgcatgcgcgaagaacagcgcgccggcaaatcggcgatccagtcg
atccaggcgggcttcgagcgcgcctggggcacgatcgtcgactcccacctgacccagctc
attgccgccatcgtgctctatttcctgggctcgggcccggtgcagggcttcgcggtgacc
ctggcactcggcatcctgacctcgctcttcacgtcctataccgtcacctcctaccaggtg
catgcctggttccgccgggtgcggcccaagacgctcaagatccagcatttccgcttcatc
ccggacggcaccaagatcccgttcatgaagatcagccgctacgtgatcgccttctcgatc
gtggcgagcctgctctccgtcgggtcggcctatttcaagggcttcaatctcggcatcgac
ttcgtcggcggcaccgccatcgtcatccagcatgaaggtggcccggccgatgtcggccag
gtgcgtgaactcctcgacgggctcgacctgggcgaagtgcaggtgcagggtttcggcacg
cccgaggatgtgctcgtgcgtgtgcaggcgcaggagggcggccaggacgccgaccaggtc
gccgtcaccaaggtccgcgacgcgctcgccaccgagaactacacgatccgcagcaccgaa
gctgtcagcggtaccgtctcgggtgaactggcgtggaaaggcaccattgccgtcatcgtc
gcgctcggcgcgatcctgatctacatctggttccgcttcgagtggcagttcgcgctggcc
gccgtggtcaccacgtcgcacgatatcatcatgacgatcggcctgttctcgataacgggg
ctcgagttcaacctgacatccattgcggcggtgctcacattggttggtctcagtttgaac
gagaccgtggtggtgtccgaccgtgtgcgtgagaatttgcgcaagcatcgcaagatgccg
ctgcccgagctgattgacctctcgatcaaccagaccatcgtgcgcacctcgctgacccag
ttcacggtgttcctggcgctgatcccgctggtgctgttcggtggcgaagtcatccgcagc
ttcaccatcgccatgaccttcggctgccttgtcggcatgtattcgtcgatcatcgtcaac
ggcccgatcctgatcaacttcggcctcaagtcgaagtccgaggaggatgccgcggtggcc
aagacggctgacggggcttcggtctag
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