Devosia oryziradicis: JI749_12800
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Entry
JI749_12800 CDS
T09885
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
doy
Devosia oryziradicis
Pathway
doy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
doy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JI749_12800 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
doy01007
]
JI749_12800 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
doy03016
]
JI749_12800 (serS)
Enzymes [BR:
doy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
JI749_12800 (serS)
Amino acid related enzymes [BR:
doy01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
JI749_12800 (serS)
Transfer RNA biogenesis [BR:
doy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
JI749_12800 (serS)
Prokaryotic type
JI749_12800 (serS)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
CCDC113_CCDC96_CC
Phage_scaffold
Motif
Other DBs
NCBI-ProteinID:
QQR35242
UniProt:
A0ABX7BTJ4
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All DBs
Position
complement(2552540..2553871)
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AA seq
443 aa
AA seq
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MFDIKWIRANAEAFDAAVSRRKGISVRSSDLLAIDDRRRDIIVRLNEAQEKRNALSKQIG
QAKAQKDEVKAAELMAEVARLKDFIPQGEADERAIELELRNALSVIPNLVFEDVPDGSDE
TGNVEYFGRNGSPETAAKVRAPRPAFSFAPKEHYEIGVAARGDMDFEVAAKLSGSRFVVL
KGQVARLERAIGQFMLDLHTTEHGYTEVQPPLLVRDDALFGTNQLPKFEEDLFFTPHGDS
RLALIPTAEVPLTNFVRESIVAEEELPLRLTALTPCFRSEAGSAGRDTRGMLRQHQFNKV
ELVSITTPETSVDEHERMLACAETVLQRLGLHYRVMNLCTGDIGFGAKKTYDLEVWLPGQ
DTYREISSVSVCGDFQARRMDARYRPSGEKQAPRFVHTLNGSGTAVGRCLIAVMENYQQE
DGSVLVPEVLQPYMGGLKSIGGR
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatatcaagtggatcagagccaacgccgaagccttcgacgccgccgtttcgcgg
cgcaaggggatctcggtccgctcctccgatctgcttgccatcgatgaccggcgtcgcgac
atcattgttcgcctcaacgaggcgcaggagaagcgcaatgcgctgtccaagcagatcggc
caggccaaggcccagaaggacgaggtcaaggccgccgagctgatggccgaagtcgcgcgc
ctcaaggatttcatcccgcagggcgaggcggacgaacgcgccatcgagcttgaactgcgc
aatgccctgtcggtgatccccaacctggtgttcgaggatgtacctgacggcagcgacgaa
accggcaatgtcgagtatttcggccgcaacggctcgcctgagacggccgccaaggtccgc
gccccgcggccggcgttttcgttcgcccccaaggagcactatgagatcggcgtcgcggcg
cgcggcgacatggatttcgaagtcgccgccaaactctccggcagccgctttgtcgtgctc
aaggggcaggtggcccggctggaacgcgcgattggccaattcatgctggacctgcacact
acggagcacggttacaccgaagtccagccaccgctgctggtcagggacgatgccctcttc
ggcaccaatcagctgcccaagttcgaggaggaccttttcttcacgccgcatggcgatagc
cggttggcgctgatcccgactgcggaagtgccgctgaccaacttcgtccgcgaatccatc
gtggccgaggaggaacttccgttgcgcctgaccgcgctgaccccgtgcttccgctccgaa
gccggctcggcgggccgcgatacccgcggcatgctgcgccagcatcagttcaacaaggtc
gaactggtgtccatcaccacgcccgagacttcggtggatgagcacgagcgcatgctggcc
tgtgccgagacggtgctgcaacgcctgggtctccactaccgcgtcatgaatctgtgcacc
ggcgatatcggcttcggcgccaagaagacctatgacctcgaagtctggctgcccggccag
gacacctatcgggaaatctcctcggtctcggtctgcggcgacttccaggcccgtcgcatg
gatgcgcgttatcgcccgtccggcgaaaagcaggcgccgcgcttcgtccatacgctgaac
ggctccggcacggccgttgggcgctgcctgatcgccgtgatggagaactaccagcaggag
gacggttccgtcctcgtgccggaggtgctccagccctatatgggcggcctcaagtccatc
ggcggccgctga
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