Devosia oryziradicis: JI749_12925
Help
Entry
JI749_12925 CDS
T09885
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K18954
AraC family transcriptional regulator, transcriptional activator of pobA
Organism
doy
Devosia oryziradicis
Brite
KEGG Orthology (KO) [BR:
doy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
doy03000
]
JI749_12925
Transcription factors [BR:
doy03000
]
Prokaryotic type
Helix-turn-helix
AraC family
JI749_12925
BRITE hierarchy
Motif
Pfam:
HTH_18
AraC_binding
HTH_AraC
Cupin_2
AraC_binding_2
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
QQR37835
LinkDB
All DBs
Position
complement(2580954..2581778)
Genome browser
AA seq
274 aa
AA seq
DB search
MEGVPTYALYGEAVSDRQQDWLHWETIQARSRLHGYRIAPHRHEQFFQVLSLTGGQGQVT
LDGAEFALVPSTIVVVPAMTVHGYVFSEDVEGVIVTLMATDMAEGVDSLSAGVVAASGDA
ARALDGLISEADRPGAHHDIAMRAHLSLLRVALHRAGSQSPDLGDGRARRHVQAFRQLVD
QRFRETRRISDYAGALGISPTHLSRVCRQVLGASALDIIEQRIALEARRQLLFSTLSVKQ
IGAGLGYDDPAYFTRMLKRVLGVPPMAIRRQSAR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgtccccacctatgcgctatacggcgaagcggtcagtgaccggcagcaggat
tggctgcattgggaaacaattcaggcgcgcagccgtctccatggctaccgcatcgccccg
caccggcacgagcagttcttccaggtcttgagcctgaccggggggcaggggcaggtaacc
ctggatggggcggaattcgcgctggttccgtccacaattgtggtcgttccggccatgacg
gtgcacggctacgttttcagcgaagacgtcgagggggttatcgtcacgttgatggcgacg
gacatggccgaaggcgtcgacagcctttccgccggggtcgtcgcggccagcggcgatgcg
gcccgcgcgctggatggcttgatatctgaggctgatcgccccggcgcgcaccacgacatc
gccatgcgggcccacctgagcttgctgcgggtggccttgcaccgcgcgggcagccagtcg
ccggacctgggagacgggcgcgcgcggcggcacgtccaggccttccgccaactcgtcgat
cagcgcttccgcgagacccgtcgcatttccgactatgccggcgcgctggggataagcccg
acccatctcagccgggtttgccggcaggtgctgggtgcttccgccctcgatatcatcgag
cagcgcatcgcgctcgaagcccgccgtcaactgttgttttcgactctgtccgtcaagcag
atcggggcagggctggggtatgacgatcccgcctatttcacgcgcatgctcaagcgggtg
ctcggcgtgccgccgatggccatccgccgccagtcggcccgctga
DBGET
integrated database retrieval system
