Devosia oryziradicis: JI749_13650
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Entry
JI749_13650 CDS
T09885
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
doy
Devosia oryziradicis
Brite
KEGG Orthology (KO) [BR:
doy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
JI749_13650 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
doy03019
]
JI749_13650 (rnc)
03009 Ribosome biogenesis [BR:
doy03009
]
JI749_13650 (rnc)
03036 Chromosome and associated proteins [BR:
doy03036
]
JI749_13650 (rnc)
Enzymes [BR:
doy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
JI749_13650 (rnc)
Messenger RNA biogenesis [BR:
doy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JI749_13650 (rnc)
Ribosome biogenesis [BR:
doy03009
]
Eukaryotic type
90S particles
RNase
JI749_13650 (rnc)
Prokaryotic type
rRNA processing factors
JI749_13650 (rnc)
Chromosome and associated proteins [BR:
doy03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
JI749_13650 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
QQR35391
UniProt:
A0ABX7BUB9
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All DBs
Position
complement(2724148..2724858)
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AA seq
236 aa
AA seq
DB search
MSRGARNHDKLQFRLGYKFADPDLLNRALTHSSAVSPAKRIERSYQRLEFLGDRVLGLVV
ADMLYRRYPKANEGELSRTLNTLVRKETCAIIARTLDLGPELHLGDSEARTGGADKEAIL
GDVTEAVIGAIYCDGGLGKAYEFVERMFEEFLADGQANKADAKTTLQEWAQARGLEPPTY
TQTDRSGPDHAPQFTITVTLGDYDSLSATGPSKKIAEHKAAEMFLIAQKVWKESSR
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgtggcgcacgcaaccacgacaagctgcagttccggctcggctacaagtttgcc
gacccggacctgctcaaccgcgcgctgacccattccagcgctgtctcgcctgccaagcgc
atcgagcgcagctaccagcgcctggaatttctcggcgaccgcgtccttgggctcgtcgtg
gccgacatgctctaccgccgctatcccaaggccaatgagggcgaactgagccgcacgctc
aacacgctggttcgcaaggaaacctgcgcgatcatcgcccgcacgctcgatcttggcccc
gaacttcatctgggcgacagcgaggcccgcaccggcggcgccgacaaggaagccatcctg
ggcgacgtgaccgaagcggtcatcggcgccatctattgcgatggtggcctcggcaaggcc
tatgagttcgtcgagcgcatgttcgaggaattcctggccgacggccaggccaacaaggcc
gatgccaagaccacgctccaggaatgggcccaggcccgcggcctcgagccgcccacctat
acccagaccgaccgcagcggccccgatcacgcgccgcaattcaccatcaccgtcacgctt
ggcgattatgatagcctgagcgccaccggcccttcaaagaagatcgccgaacacaaggct
gccgagatgtttctgattgcccagaaggtgtggaaggagtcctccagatga
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