Devosia oryziradicis: JI749_13750
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Entry
JI749_13750 CDS
T09885
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
doy
Devosia oryziradicis
Pathway
doy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
doy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JI749_13750
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
doy02000
]
JI749_13750
Transporters [BR:
doy02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
JI749_13750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
QQR35411
UniProt:
A0ABX7C032
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All DBs
Position
2745411..2746559
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AA seq
382 aa
AA seq
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MKRREFMLAAGTFAGALMLPRMSFGAEGVIDVYFSSDQNVIDFWTNVVKPKFEAANAGLT
LNLVDGGDGAGVAAIADRALAALAGGQDPQADLLEGFDSRVTVDGIAKGLFVDFEQAGLS
NYSKINPLAFDIPTNLPYRGSQVLLAYDTTKLDPANVPKTFADLVAWIKANPGQFIYNRP
NKGGSGGNFVRRAIYEANGKDPAKFTVDNYTAEAGEAMLNPAWDILKDLAPSLFDGGAYT
SGNTQSIQLLGQSAVTMIPAWSDQALSAIAQGVLPETTGLVQLQDLGLPGGFTKLAVLTN
GTNKDAALKLADFLLSEEIQSAVLTELGGFPGVSWDYVSAELREKFADLIPQTIPNFPSG
DWEKAINDGWYRAVAPNVDPAS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggcgtgaattcatgcttgcagccggcacatttgccggcgccctgatgctgccc
cgcatgtcgtttggcgccgaaggcgtcatcgacgtctatttcagctcggaccagaacgtc
atcgacttctggaccaatgtggtgaagccgaagttcgaggcagccaatgccggcctgacg
ctcaacctggtggatggcggcgatggtgccggcgtggcggccatcgccgaccgcgccctg
gcggccctggccggcggccaggatccgcaggcggacctgctggaaggcttcgacagccgc
gtgacggtggacggcatcgcaaaaggcctgttcgtcgactttgaacaggcgggtctcagc
aactattccaagatcaatccgctggccttcgacattccgaccaacctgccctatcgcggt
tcgcaggtcttgctcgcctacgatacgaccaagctcgacccggccaatgtgcccaagacc
tttgcggacctggttgcgtggatcaaggccaatcccggccagttcatctacaaccgcccc
aacaagggcggctcgggcggcaatttcgtgcgccgcgccatctacgaggccaatggcaag
gacccggccaagttcaccgtcgacaattacacggcagaagccggcgaggcgatgctcaac
ccggcctgggacatcctcaaggacctagccccgtcgctgttcgatggcggcgcctatacg
tcgggcaatacccagtccatccagctgctcggccaatcggccgtaacgatgatcccggcc
tggtcggaccaggcgctgtcggccatcgcccagggcgtgctgccggaaaccacgggcctg
gtgcagttgcaggacctcggcctgcccggtggcttcaccaagctggccgtgctgaccaac
ggcaccaacaaggacgccgcgctcaagctcgccgacttcctcctcagcgaagaaatccag
tcggcggtgctcaccgaactgggcggcttccccggcgtatcgtgggattatgtatcggcc
gaactgcgcgaaaagttcgccgatctcattccgcagaccattcccaacttcccgagcgga
gactgggaaaaggccatcaatgacggctggtatcgtgccgtggcgccaaacgtggacccg
gcttcgtga
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