Devosia oryziradicis: JI749_14370
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Entry
JI749_14370 CDS
T09885
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
doy
Devosia oryziradicis
Pathway
doy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
doy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JI749_14370
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
doy02000
]
JI749_14370
Transporters [BR:
doy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
JI749_14370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QQR35518
LinkDB
All DBs
Position
complement(2874251..2875837)
Genome browser
AA seq
528 aa
AA seq
DB search
MKLFRAALLATALSLPLAAGAVYAATPADALVIAQNIDDIVALDPAQAYEFTSGEINTNV
YDRLVGYEAEDTTVLAPGLATEWVADDAAKTITFTLRDAKFASGNPVRPEDVVFSFSRVI
KLNLTPAFILAQLGWTPENMDDMVTIADGKVVVKYEGDFSSAFVLNVLASRPASIVDEVL
VMEHAEGEDLGNAWLNTHSAGSGPFVMEDYRPAEIVRLTANESYFRGAPAMKSIIIRHVA
EAATQQLLLTSGDVDIAKNLTPDQIAGLPADTVKVETYPQAAVHFLSFNQKDEELTPPAV
WEAARYLVDYDGMTQSFLKGQMEVHQAFWPKGFPGSYDETPYTLDVEKAKQILADAGVKT
PINVTLDVINSTPFTDMAQSLQATFAEAGINFEILPGTGAQVITKYRERTHQAMLLYWGP
DFMDPHSNAKAFAYNSDNSDENYTATTTWRNAWAVPEELNAKVTAALAEPDQAKRNEMYV
EIQKEAQASSPIVIMFQAALTIAMANNVEGYVNGATSDFVYYRLVTKQ
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaagctctttagggctgctctgcttgcaactgcgctttcgctgccgctggcagccggc
gccgtctatgccgctacccccgccgatgcgctggtcattgcgcagaatatcgacgacatc
gtcgcgctcgaccccgcccaggcgtatgaatttacctcgggcgagatcaacaccaacgtc
tatgaccgcctggtcggctacgaagccgaggatacgacggtcctggccccgggcctcgcc
accgaatgggtcgccgacgacgccgccaagaccattacgttcaccctgcgcgacgccaag
ttcgcctccggcaatccggtgcgtccggaagatgtggtcttctcgttctcccgcgtcatc
aagctcaacctgaccccggctttcattctcgcccagctcggctggacccccgagaacatg
gacgacatggtcaccattgctgatggcaaggtggtcgtgaagtatgagggcgatttctcc
tcggccttcgtgctcaacgtcctggcctcgcgtccggcctcgatcgttgacgaagtgctg
gtcatggaacatgccgaaggcgaagacctgggcaatgcctggctcaatacccattcggcc
ggttccggcccgttcgtgatggaagactaccgcccggccgagatcgtccgcctcaccgcc
aacgagagctacttccgcggcgctccggcgatgaaatcgatcatcatccgccatgtcgcc
gaagccgccactcagcaactgctgctgacctcgggtgacgttgacattgccaagaacctc
acccccgaccagatcgccggcctgcccgccgacaccgtcaaggtcgagacctatccgcaa
gccgcggtccacttcctctccttcaaccagaaggacgaagagctgactccgccggccgtg
tgggaagccgcccgctacctcgtcgactacgacggcatgacccagtccttcctcaagggc
cagatggaagtgcaccaggccttctggcccaagggcttccccggttcctacgatgaaacg
ccctacacgctcgacgtcgaaaaggccaagcagatcctggccgatgccggcgtcaagacg
ccgatcaatgtcaccctggacgtgatcaactcgaccccgttcaccgacatggcgcagtcg
ctgcaggccacctttgccgaagccggcatcaacttcgaaatcctgcccggcaccggcgct
caggtcatcaccaagtatcgcgagcgtacccaccaggccatgctgctgtactggggcccg
gacttcatggacccgcattccaacgccaaggccttcgcctacaattccgacaattcggat
gagaactacaccgcaaccaccacctggcggaacgcctgggcggtgccggaagagctaaat
gccaaggtcacggctgccctggccgagcccgaccaggccaagcgcaatgagatgtatgtc
gaaatccagaaggaagcccaggcgtcctcgcccatcgtcatcatgttccaggctgccctg
accatcgccatggccaacaatgtcgaaggctatgtcaacggcgcgacgtcggacttcgtc
tactaccgcctcgtgaccaagcagtag
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