Devosia oryziradicis: JI749_14465
Help
Entry
JI749_14465 CDS
T09885
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
doy
Devosia oryziradicis
Pathway
doy03420
Nucleotide excision repair
doy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
doy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JI749_14465
03430 Mismatch repair
JI749_14465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
doy03400
]
JI749_14465
Enzymes [BR:
doy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JI749_14465
DNA repair and recombination proteins [BR:
doy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JI749_14465
MMR (mismatch excision repair)
Other MMR factors
JI749_14465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
HHH
AAA_12
DEAD
Motif
Other DBs
NCBI-ProteinID:
QQR35535
LinkDB
All DBs
Position
2897138..2899207
Genome browser
AA seq
689 aa
AA seq
DB search
MLASLNYLDALNPEQRRAVEHGTGQERPGPLLVIAGAGSGKTNTLAHRVAHLMVNGADPR
RILLMTFSRRAASEMSRRVERIAAQVMGKNSSLLTDALTWAGTFHGIGARLLREHAAQIG
IDPAFTIHDREDSADLMNLVRHELGMSEAKSRFPTKGTCLAIYSRVVNAQGELETVLKET
FPWCAMWAGELRTLFGAYVEAKQRQNVLDYDDLLLYWAGMMSDPGIAAAVSGKFDHVLVD
EYQDTNRLQASVLLAMRPGGEGLTVVGDDAQSIYSFRAATVRNILDFPAAFTPAADIVTL
DRNYRSTQPILSAANAVIDMASERFTKNLWTDRLSDAKPLLVTVRDEADQARYVVHKVLE
AREGGMSLKNQAVLFRTSSHSGPLEIELTRRNIPFVKFGGLKFLDAAHIKDLLAILRWAE
NPRDRVAGFRVLQLLPGVGPGTAGKVLDAMATGPDPIWVLGEIPAPPRAAEGWTGLVDML
GRLSRKDAGWPLELGYARLWYEPLMEQAYEDAAIRMQDIMQLEQIAGGYPSRERFLTELT
LDPPDATSDQSGVPHLDEDYLILSTIHSAKGQEWKAVHVLNVVDGCIPSDLGTGSTHELE
EERRLLYVAMTRARDELNLIVPQRFFVTQQHKHGDKHLYAQRTRFIPRAMVPLFEDILWP
PVTPAYIEGLSPAPVKMDIGAQMRGMWSK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgccagcctcaactacctcgatgcgctcaacccggaacaacgccgggcggtggag
catggcaccgggcaggaacggccggggccactgctggtgatcgcgggggccgggtcggga
aagaccaacacactggctcatcgcgtcgcgcacctgatggtgaacggcgccgaccccagg
cgcatcctgctgatgacattctcgcggcgcgcagcaagcgagatgagccggcgggtagag
cgaatcgcggcccaggtcatgggcaagaattcgagcttgctgacggacgcgctgacctgg
gcgggcacgttccatggcatcggtgcccggctgctgcgcgagcacgccgcacagatcggc
atcgatccggctttcaccatccatgaccgggaagactcggcggacctgatgaacctggtt
cggcatgagctgggcatgagcgaagccaagagccggtttccgaccaaggggacgtgcctg
gccatctattcccgcgtggtcaacgcacagggcgaattggagactgtgctcaaagagacg
tttccctggtgcgcgatgtgggcgggcgaattgcggacgctgttcggcgcctatgtcgag
gccaagcagcggcagaacgtgctcgattacgatgacctgctgctctattgggccggcatg
atgagcgaccctggcattgcggccgccgtgtcgggcaaattcgatcatgttctggtcgat
gagtaccaggacaccaatcggctgcaggccagcgtgctgctcgcgatgcgacccggcggc
gaaggcctgacagtggtcggtgatgacgcgcagtctatctattcgttccgcgccgccacc
gtgcgcaacatcctcgattttccagcggcattcaccccagcggccgacatcgtgacgctg
gaccggaattaccgctcgacgcagcccatactcagcgcggccaatgccgtgatcgacatg
gccagcgagcgttttaccaagaacctgtggaccgaccgcctgtcggacgccaagccgctg
ctggtgacggtgcgggacgaggcggaccaggcgcgctacgtggtgcacaaggtgctggag
gcgcgcgagggcggcatgtcgctcaagaaccaggccgtgctgttccgcacctcgagccat
tccggaccgctggaaatcgagctgacccggcgcaacattccgttcgtcaaattcggcggg
ctcaaattcctcgacgcggcgcacatcaaggacctgctggccattttgcgctgggcagaa
aatccgcgcgaccgggtggcgggcttccgggtgctgcaactgctgccgggcgtcggcccc
ggaacggcgggcaaggtgctcgacgccatggccaccggcccggacccgatctgggtgctg
ggggaaattccggcgccgccgcgcgccgccgagggctggactggcctggtcgatatgttg
ggccgcctgtcgcgcaaggatgccggctggcccctggagctcggttatgcgcggctctgg
tatgagccgctgatggagcaggcctacgaggacgctgcgatccgcatgcaggatatcatg
cagctcgaacagatcgcggggggctatccgagccgcgagcggtttttgaccgagctgacg
ctggatccgcccgatgcaaccagcgaccagtcgggcgtcccgcatctggacgaggactac
ctgatcctttccaccattcattcggccaaggggcaggaatggaaggcggtgcatgtgctc
aacgtggtggacggctgcattccctcggacctggggaccggctcgacgcatgagctcgag
gaagagcggcggctgctctacgtggcgatgacgcgggcacgggacgagttgaacctgatc
gtgccgcagcggtttttcgtgacgcagcagcacaagcatggcgacaagcatctctacgca
cagcggacgcggttcattccccgcgcgatggtgccgctgttcgaggacatcctctggcca
ccggtgacgccggcctatatcgagggcctgtcgccggcgccggtcaaaatggatatcggc
gcacagatgcggggcatgtggagcaagtag
DBGET
integrated database retrieval system
