Devosia oryziradicis: JI749_16185
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Entry
JI749_16185 CDS
T09885
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
doy
Devosia oryziradicis
Pathway
doy00860
Porphyrin metabolism
doy01100
Metabolic pathways
doy01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
doy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
JI749_16185 (cobD)
Enzymes [BR:
doy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
JI749_16185 (cobD)
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Motif
Pfam:
CobD_Cbib
TMEM208_SND2
Motif
Other DBs
NCBI-ProteinID:
QQR35859
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Position
complement(3250801..3251763)
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AA seq
320 aa
AA seq
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MYAFLPPLALLVERWVGYPARLTAAIGHPVMWFGFVINYLEARLNTEKRNAEQRRLAGLV
ALAVLLVLVLVVAVAAQQAVRAIPGGFVFEILVATPFLAQKELGRAVEAVATALGVSLEA
GREAVSHIVGRDPQALDEAGVSRAAIETLAESTSDGVVAPWFWLVLLGLPGIALYKAINT
ADSMIGHLNERYRDYGWAAAKLDDLVNLLPARLTAVLITAACFLTQHARPGGAWAIATRD
ARKHASPNSGWPEAAFAGALGFRLGGPRSYAGELVDLPSFGDGKSELVGSDILRALVLYR
ATLNVLLGVSVVAGLLIWAA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtatgccttccttcccccactcgcgctcctcgtcgagcgatgggtcggatacccagcg
cgcctgaccgctgccattggccatccggtcatgtggttcggtttcgtcatcaactatctc
gaggcacgcctgaacaccgaaaaacgcaatgccgagcagcgccggctcgcgggcctggtg
gcgctggcggttctgctggtgctggtgctggtcgtggcggttgctgcccagcaggcggtg
cgggccattcccggcggattcgtctttgaaatcctggtcgccacgccctttctcgcgcaa
aaggagctaggtcgcgccgtcgaggccgtggcgaccgccttgggcgtttcgctcgaagcc
ggccgcgaggcagtcagccacattgtcggccgcgatcctcaagccctcgacgaggccggc
gtgtctcgcgctgccatcgaaacgcttgccgaaagcacctcggacggcgtcgtagcgccc
tggttctggctggtccttctcgggctgccggggatcgcgctctacaaggcgatcaacacg
gccgattccatgatcggtcacctgaacgagcgctatcgggactatggctgggccgcagcc
aagctggacgacctcgtcaacttgctgcccgcgcgcctgaccgcggtgctgatcaccgcc
gcttgcttcctcacccaacatgccagaccaggcggcgcctgggccatcgccacaagagat
gcgcgcaagcatgcctcgcccaattcgggctggcccgaggccgcctttgccggtgccctg
ggcttccggctcggcggcccgcgcagctatgcgggcgaattggtcgacttgcccagtttc
ggcgatggaaaatcagagctggtgggcagcgatatattgcgggcgctggtgctttatcga
gcgacgctcaacgtgctgctgggtgtcagtgttgtagctgggctcctgatctgggcggcg
tga
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