KEGG   Devosia oryziradicis: JI749_16880
Entry
JI749_16880       CDS       T09885                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
doy  Devosia oryziradicis
Brite
KEGG Orthology (KO) [BR:doy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:doy03400]
    JI749_16880
Enzymes [BR:doy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     JI749_16880
    5.6.2.6  RNA 3'-5' helicase
     JI749_16880
DNA repair and recombination proteins [BR:doy03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    JI749_16880
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 PSD4
Other DBs
NCBI-ProteinID: QQR35984
LinkDB
Position
3391818..3394310
AA seq 830 aa
MSTDVILPFIITDWFTRKGWAPRQHQLDVLASWQTGASALLIAPTGAGKTLAGFLPTLVD
LAEGQFEGLHTLYISPLKALAVDVQRNLNAPIFEMGLKITAETRTGDTPASKRARQRAEP
PNILLTTPEQLCLLISHPHADLFFGSLRRIVLDELHALVTSKRGELLSLALARIARLAPN
LRITALSATVARPDLLRDWIAQPVPGQPTLLLTASGGAPPVLEILETEQRLPWAGHSANY
AHRDLYETIKRHKTTLLFVNTRSQAEMLFQGLWAVNDDMLPIALHHGSLSVEQRRKVESA
MVAGELKAVVCTSTLDLGIDWGDVDLVVQVGAPKGSSRMLQRIGRANHRLDEPSKAVLVP
SNRFEVLECEAALEAVAESHQDSEDPVSGGYDVLAQHVLGMACASPFAADDLYDEVRRAW
PYRDLPRGQFDRVVEFVATGGYALQAYERYARLKKTEDGKWRIANPQVAQQYRLNIGTII
EEPMVKVRLIRQRGLKKGQSNSPVGYGGRVLGEMEEYFFGTLLPGDTFMFGGEIVAFEGM
KDNEAFVSRAQSANPKIPSYMGGKFPLSTYLAERVRRMLDTPESWSALPDQVSDWLRLQR
DISVLPRRDSLLVETFPRGSQNFLVCYPFEGRLAHQTLGMLLTRRLERARARPLGFVASE
YALAIWGLGDLSALVRTGRLSLDDLFAEDMLGDDLEDWLDESALMKRTFRNCAIIAGLIE
RRHPGKEKSGRQITMSSDLIYDVLYQHEPDHILIQATRRDAARGLLDIERLGDMLRRISG
HIVHKPLARISPLAVPVMLDIGKEPIFGEGRESAMADAADELMREALGQS
NT seq 2493 nt   +upstreamnt  +downstreamnt
ttgagcactgacgttatcctacccttcatcatcaccgactggtttacccgcaagggctgg
gcgccgcggcagcatcagctcgatgtactggccagctggcagactggcgcgtcggcgctg
ttgatcgccccgaccggtgcgggcaagacgctggcgggctttttgccgacgctggtcgac
ctggccgagggccagttcgagggacttcacacgctctacatctccccgctaaaggcactg
gcggtggacgttcagcgcaacctcaatgcacccatcttcgagatgggcctcaagattacc
gccgagacccgcacgggcgacacgccggcgtcgaaacgggcgcgacaacgagccgagccg
cccaacatcctgctgaccaccccggagcaactgtgcctgctgattagccacccgcatgcc
gacctgttcttcggctcgctgcgccgcatcgtgctggacgaattgcatgcattggtgacg
tccaagcgtggcgagctgttgtcgctggccctggcccgcatcgccaggctcgcgcccaat
ctgcgcatcacggcactcagcgccaccgtcgctcggccggacctgctgcgcgactggatc
gcccagccggtgcccgggcaaccaaccctcctgctgacggcctcgggcggcgcgcctccg
gtgctcgaaattctcgaaaccgagcagcgcctgccctgggcgggccactcggcgaactac
gctcatcgcgatctctacgagaccatcaagcggcacaagacgacactgcttttcgtcaat
acgcgcagccaggccgaaatgctgttccagggcctgtgggcagtcaatgacgacatgctg
cccattgccctgcaccacggttccctgtcggtggagcagcggcgcaaggtggagagcgcc
atggtggcaggcgagctcaaggccgtggtctgcacatcgacgctggatctgggcatcgac
tggggcgatgtcgatctggtcgtgcaggtcggtgcgcccaagggttcttcgcgcatgctg
cagcgcatcggccgggccaatcaccggctcgacgagccgagcaaggcggtgctggtcccg
tccaaccgtttcgaggtgctcgaatgcgaggcggcgctggaggcagtggccgagagtcat
caggacagcgaggaccctgtcagcggcggctatgacgtgctggcccagcatgtgctgggc
atggcctgcgcttcgccgttcgccgccgacgacctttatgatgaagtgcggcgcgcctgg
ccctatcgcgacctgccgcgggggcagttcgaccgggtggtcgaattcgtcgccaccggc
ggctatgcgctccaggcctatgagcgctatgcccgcctcaagaaaaccgaggacggcaag
tggcgtatcgccaatccgcaggtggcccagcaataccggctcaatatcggcaccataatc
gaggagccgatggtcaaggtgcggctcatccgccagcgcgggctcaagaaggggcaaagc
aacagcccggtcggctatggcggacgcgtactgggcgagatggaggaatatttcttcggc
acgctgctgccgggcgacacattcatgttcggcggcgaaatcgtcgccttcgaaggcatg
aaggataatgaagcattcgtcagccgcgcccaatcggccaatcccaagatcccaagctat
atgggcggcaagttcccgctctcgacctacctggccgagcgggtccgtcgcatgctcgat
acgccagagagctggagcgccctgcccgaccaggtcagcgactggcttcgattgcagcgt
gacatctcggtgctgccccggcgggacagcctgctggtcgagacctttccacgcggttcg
cagaattttcttgtctgctaccccttcgaggggcggctggcgcatcagaccttgggcatg
ctgctgacacgacgcctcgaacgcgcacgggccaggccgctcggcttcgttgccagtgaa
tatgccttggccatatgggggcttggcgacctctcggcgctggtccgcaccggccgcctt
tcgctcgacgacctgttcgccgaagacatgctgggcgacgacctggaagactggctggac
gaatcggcgttgatgaagcgcaccttccgcaactgcgcgatcattgccgggctgatcgag
cgccggcatccgggcaaggagaagtccgggcggcagatcacgatgagttccgatctcatc
tatgacgtgctctaccagcacgagcccgaccatatcctgatccaggcgacccgccgcgat
gccgcgcgagggctactcgacatcgagcggctgggcgacatgctgcggcgcatcagcggc
catatcgtgcataagccgctggcgcggatttccccgctcgcggtgcccgtcatgctcgat
atcggcaaggagccgattttcggggaaggccgcgaatcagctatggcggatgctgcagac
gaattgatgagggaagccctcgggcaatcttga

DBGET integrated database retrieval system