Devosia oryziradicis: JI749_17320
Help
Entry
JI749_17320 CDS
T09885
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
doy
Devosia oryziradicis
Pathway
doy03030
DNA replication
doy03430
Mismatch repair
doy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
doy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JI749_17320
03430 Mismatch repair
JI749_17320
03440 Homologous recombination
JI749_17320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
doy03032
]
JI749_17320
03400 DNA repair and recombination proteins [BR:
doy03400
]
JI749_17320
Enzymes [BR:
doy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JI749_17320
DNA replication proteins [BR:
doy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JI749_17320
DNA repair and recombination proteins [BR:
doy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JI749_17320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_16
AAA_22
AAA_30
RuvB_N
AAA_5
AAA_14
AAA_18
TsaE
AAA_24
AAA_19
nSTAND3
AAA_28
AAA_assoc_2
RNA_helicase
SRP54
VapE-like_dom
CbiA
DUF815
DAP3
Rad17
Motif
Other DBs
NCBI-ProteinID:
QQR36063
LinkDB
All DBs
Position
complement(3487786..3489555)
Genome browser
AA seq
589 aa
AA seq
DB search
MADAPTSPYLVLARKYRPRDFTTLVGQDAMVQTLGNAFAQNRIHHAFILTGVRGVGKTTT
ARILARAFNYEDKSGPHPTLDLSVEGEHCRAIIEGRHVDVIEMDAASNTGINDIREIIDS
VKYAPSSAPYKVYVIDEVHMLSTAAFNGLLKTLEEPPPYVKFIFATTEIRKVPVTILSRC
MRFDLRRITPEIMTAYLESILGQEGISFEPEALAMIVRAGEGSARDNLSLLDQAIAHGNG
TVTATTVKAMLGLGDRARIIDLFEELMGGQIGQAIETMRALYDMGADPQTLVADLADFTH
LVTRIKVVPSAADDVSLTPDERRRGAELAGKLPMRALTRAWQILFKGYDEVARASNGLQA
AEMALIRLAYAADLPSPDDLIARLANQPAPAPSLPPMAPIGRGPSNGGGGASAMRVESPR
PVMTEAVAAQPTTLQAARPAEAPVVQPAMATVGSYKELIALAGAKRDMLLKLALEGQMRP
VSFEQGKIEIALVEGANPASVNTLSARLQEWTGQRWLVTVSTKPIDGPTLRQEKEERAAL
QRAQAHDDPLVQAILNTFPGARVVNVKVKDELDATPPDLPPPPPEEDDE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgcaccgacctcgccctatctcgtgctcgcccgcaaataccggccgcgcgat
ttcaccacgctggtcggccaggacgcgatggtgcagacgctgggcaatgccttcgcgcag
aaccgcatccatcatgccttcatcctcaccggtgtgcgcggcgtgggcaaaaccacgacc
gcccgcatcctagcccgggccttcaactacgaggataagtccggcccccacccgacgctc
gatctgagtgtcgagggcgaacattgccgcgccatcatcgaggggcgccatgtcgacgtc
atcgagatggacgccgccagcaataccggcatcaacgacatccgcgagatcatcgactcg
gtgaaatacgcgccgagttcggcgccctataaagtctacgtcatcgacgaagtccacatg
ctctcgaccgcggccttcaatggtctgctcaagacgctcgaagagccgccgccctatgtg
aagttcatcttcgccaccaccgaaatccgcaaggtgccggtgacgatcctcagccgctgc
atgcgcttcgacctgcgccgcatcacgcccgagatcatgacggcctatctcgagtcgatc
ctggggcaggaaggcatcagcttcgagcccgaggcgctggccatgatcgtccgcgccggc
gagggctcggcccgcgacaatctcagcctgctcgatcaggccatcgcccatggcaatggc
acggtgaccgcaaccaccgtcaaggccatgctggggcttggcgaccgtgcccgcatcatc
gatctcttcgaggagctgatgggcggccagatcggccaggccatcgagaccatgcgcgcc
ctctacgacatgggcgccgatccgcaaacgctggtggctgacctggccgacttcacccat
ctggtgacgcgcatcaaggtcgttccatcagcggccgacgatgtctcgctgacgcccgac
gagcgtcgccggggcgccgaactggcgggcaagctgccgatgcgggcgctgacccgcgcc
tggcagatcctgttcaagggctatgacgaggtggcccgcgccagcaatggcctgcaggcg
gccgaaatggcccttatccggctggcctatgccgcggacctgcccagccccgacgatctc
atcgcacgcctggccaaccagccagcgcccgcgccgagcctgccgcccatggcgccgatc
gggcgcggtccgtccaatggaggcggcggggcgtctgccatgcgggtcgagtccccgcgg
cccgtgatgaccgaagccgtggccgcgcagcccaccacgttgcaggccgcgcggcccgcc
gaggccccggtcgttcaacccgccatggccaccgtcggctcgtacaaggagctgattgcc
cttgccggcgccaagcgcgatatgctgctcaagctggccctcgaaggccagatgcgaccg
gtttccttcgagcagggcaagatcgagatagccctcgtcgagggcgccaacccggccagc
gtcaatacgctgtcggcacgcctgcaggaatggaccggccagcgctggctggtcaccgtg
tcgaccaagccgatcgatggtcccaccctccgccaggagaaggaagaacgtgctgcgctg
cagcgcgcgcaggcgcatgacgatcctctggtgcaggctattctcaacacctttcccggc
gccagggtcgttaacgtcaaggtcaaggacgagcttgacgcaacgccccccgatctgccg
cccccgccacctgaagaggacgacgaatga
DBGET
integrated database retrieval system
