Dolichospermum sp. UKL201: HEP80_02170
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Entry
HEP80_02170 CDS
T10192
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
doz Dolichospermum sp. UKL201
Pathway
doz03410
Base excision repair
doz03430
Mismatch repair
doz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
doz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HEP80_02170 (recJ)
03430 Mismatch repair
HEP80_02170 (recJ)
03440 Homologous recombination
HEP80_02170 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
doz03400
]
HEP80_02170 (recJ)
DNA repair and recombination proteins [BR:
doz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HEP80_02170 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HEP80_02170 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HEP80_02170 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
QSV52893
LinkDB
All DBs
Position
complement(455638..457944)
Genome browser
AA seq
768 aa
AA seq
DB search
MEWILTGTEKPPDWFIELVKSYPTGGDFAAQLFWQRGIQDQEKLAAFINYQSYQPASSFE
FGQEMNLAVERLITAGKTGAKIVIWGDFDADGITSTAVLWDGLGEFFQQHRQLSYYIPNR
LTESHGLNKPGIDILAAQGCQLIVTCDTGSTNIAEIIYAQSLGIDVIVTDHHTLPSERPP
VVAIINPRYLAKEHPLYHLSGVAVAYKLVEALYISLPDIPAHPLTDLLDLVAVGLIADLV
QLSGDCRYLAQLGIQQLHTDYQKLPTARRRPGVGKLLELCQKSGDRPTDISFGLGPRINA
VSRIHGDANFCVELLTSRDMQRCQQLAEETELANSRRKSLQKDVQAQVTKKLNQLDLSTT
SVIVLEDPQWAGGVLGLVAGQIAQETGRPTILLSTEAKENKTDSSPSFARGSARSINSVD
LYQLVQEQAHLLDRFGGHPFAAGLSLLVENIPLFTAAINQKLRQSLGGINLTPTVQADLV
VTVADLGKDLFLELKLLEPCGMGNPIPKLLIKNCWFENSWHRNEQDLKGNKIQYIKTDFN
IRDDSTNNPFPGIWWGHYKEELPIGKCDCIAEIDFNSFKKRYEIRLVAVRSHTGTELKTQ
NSAMILDWRNQEDIGELKSEKSLLIMKDCPTNWDNLRLWWKQSLNQQKQLVIAWRKPQNQ
TPRDVLVTLVGIAKYLGRTNQLVTRVQILEKLGISDQSLYLGFQALKYLGFIVQRQNHHL
QISWDFKSYQKPADYAISQFLAAVREEQFQRDYFSHVPLSIIVAMIGK
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggaatggattttaacaggaacggaaaaaccccctgattggtttattgaattagtgaaa
agttacccaacaggtggtgattttgcggctcaattattttggcaacggggaattcaagat
caggaaaaattagcggcttttattaattatcaaagttatcaacctgccagttcttttgaa
tttggacaggaaatgaatttggctgtggaaaggttaattactgcgggaaaaacgggagca
aaaattgttatttggggagattttgatgcagatggaattacttcgactgcggtattatgg
gatggtttgggtgaattttttcagcaacatcgtcaattaagttattatattcccaatcgt
ttaactgaatctcatggtttaaataaaccaggaattgatattttagctgcacaaggttgt
cagttaattgttacttgtgatacgggcagtacaaatattgccgaaatcatttatgcccaa
agtttagggatagatgtgattgtgactgaccatcatacattaccctcagaacgtcctccc
gtagtcgcaattatcaatcctcgttatttagctaaggaacatcctttatatcatctttct
ggtgtggctgttgcttataaattggtggaagctttatatataagtttgccagatattcct
gcacatcctttaactgatttactagatttagttgcagtgggattaattgccgatttggtc
caattaagtggtgattgtcggtatttggcacaattgggaattcaacaattacacacggat
tatcaaaaactaccaacagccagaagaaggccaggtgtgggtaagttattagaattatgc
cagaaaagtggcgatcgccctacagatatttcttttggtttgggaccgcgaattaatgcg
gttagtcgcattcatggtgacgctaatttttgtgtagaattattgacgagtagagatatg
cagcgttgtcaacaacttgcagaagaaacagaattagctaattcccgtcgtaagtcttta
caaaaagatgtccaagcccaagttacgaaaaaactcaatcaattagacttatccactacc
agcgtcattgttttagaagatcctcaatgggcaggtggtgttttgggtttggttgctggt
caaattgcccaagaaacgggacgaccgacaattttattaagtacagaagcaaaggagaat
aagacagattctagcccatcctttgcgcgaggttcagcacgttcaattaattctgttgat
ttatatcaattagttcaagaacaagctcatttattagatcgttttggtggacatcctttt
gcagcgggtttgagtttattagtagaaaatatccccttatttacagccgcaattaaccaa
aaattacgccaatctttaggagggattaatcttactcccacagtccaagctgatttggtg
gtgacggttgcagatttgggtaaagatttatttttagaattgaaacttttagaaccctgt
ggtatgggaaatcctattcccaagctactaattaaaaattgttggtttgaaaattcttgg
catagaaatgaacaagatttaaaaggaaataaaatccaatatattaaaactgattttaat
attcgagatgattctactaataatccctttccaggaatttggtggggacattataaggaa
gaattgcctataggtaaatgtgattgtattgccgaaattgattttaatagttttaaaaaa
cgctatgaaattagattagttgcagtacgttcccatacgggaactgaactgaaaactcag
aattcggcaatgattttagattggagaaatcaggaagatataggagaattaaaatcagaa
aaatcattattaattatgaaagattgtcctactaattgggataatctccggttatggtgg
aaacaatcgctaaatcaacaaaaacaattagtgattgcttggagaaaaccccaaaatcag
actcctagagatgttttagtaactctggtaggtattgctaaatatcttggtcgcacaaac
cagctagttacccgtgtgcagattttagagaagttgggtattagtgaccaaagcctatat
ttaggatttcaagctttaaaatatttaggctttatcgtccaacgtcaaaatcatcactta
caaataagttgggattttaaatcttatcaaaaacctgctgattatgctattagtcaattt
ttagccgcagttagagaagaacaatttcaaagagattatttttctcatgttcctctatct
attattgttgccatgattggtaaataa
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