Dolichospermum sp. UKL201: HEP80_02365
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Entry
HEP80_02365 CDS
T10192
Name
(GenBank) RNA polymerase sigma factor, RpoD/SigA family
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
doz Dolichospermum sp. UKL201
Brite
KEGG Orthology (KO) [BR:
doz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
doz03021
]
HEP80_02365
Transcription machinery [BR:
doz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HEP80_02365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
LexA_DNA_bind
HTH_Mga
HTH_25
Motif
Other DBs
NCBI-ProteinID:
QSV52929
LinkDB
All DBs
Position
complement(509560..510516)
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AA seq
318 aa
AA seq
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MKTAQSATDLVRTYLREIGRVPLLTHEEEIFYGKQVQRSTALHEIREGLATRLGHEPSVE
EWATAANIEVSELNQAIAVGEIAKRKMVEANLRLVVSVAKKYIKRNVDLLDLIQEGSIGM
QRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKARTIRLPIHITEKLNKIKKAQRQLSQ
GLGRAPTVAELSQELDLTPKQVREYLEKARLPLSLDLRLGDNYDTELGEMLEDTGATPED
FVMQTSLSYDLERIMSELTPQQKEVISLRFGLVDGQSLTLAKIGEVLNISRERVRQIERE
ALNKLRKSKATMNEYLAS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccgctcaatcagccaccgacctcgtgcggacctacctgcgtgagattggccgt
gtgccactcctcacccacgaagaagagattttttatggtaaacaggtgcaacgatctact
gctttgcatgagatcagggaaggtcttgctacccggttaggtcatgaacctagtgtagaa
gaatgggcaacagccgccaatatagaagtatcagaattaaatcaggcgatcgctgttggt
gaaatagccaaacggaaaatggtagaagccaatctccgtttagtcgtgtccgttgccaaa
aagtacattaaacgcaatgttgatttacttgacctcattcaagaaggcagcatcggaatg
caacgaggtgtagaaaaatttgaccccaccaaagggtacagattttctacctatgcctat
tggtggatacgtcaagctattactcgggcgatcgccgaaaaagcccggactattcgcttg
cccattcatattacggaaaaactcaacaaaattaaaaaagcccagcggcaactatcccaa
ggtctaggacgtgcgcccacagtagcggaattatcccaagagttagatttaacacccaaa
caggtgcgagaatacttagaaaaagcccgtctgccattatctctagacttgcggttagga
gataactatgatactgaactgggagaaatgttagaagacacaggggcaacaccggaagat
tttgtcatgcaaacttccctctcttatgacttagaacggatcatgtcagaactcactccc
caacaaaaggaagtcattagtctccgctttgggttagtagatggacaatctttaactctg
gctaaaattggtgaagtcttgaatattagccgggaaagagtccgccaaattgaacgcgaa
gctttaaacaaacttcgcaaatctaaagccactatgaatgagtaccttgccagttag
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