Dolichospermum sp. UKL201: HEP80_02920
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Entry
HEP80_02920 CDS
T10192
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
doz Dolichospermum sp. UKL201
Brite
KEGG Orthology (KO) [BR:
doz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
doz03032
]
HEP80_02920 (topA)
03400 DNA repair and recombination proteins [BR:
doz03400
]
HEP80_02920 (topA)
Enzymes [BR:
doz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HEP80_02920 (topA)
DNA replication proteins [BR:
doz03032
]
Prokaryotic type
DNA Topoisomerases
HEP80_02920 (topA)
DNA repair and recombination proteins [BR:
doz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HEP80_02920 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QSV53017
LinkDB
All DBs
Position
complement(676517..678703)
Genome browser
AA seq
728 aa
AA seq
DB search
MPKRLLVVESPGKVKKLSQILGADWIVRASCGHIRELSNEGDDSLGFTMDGNTVRCNYVP
RDQRAKETIQQLKAAVRQVDEVVLATDPDREGETIAWHLKETLGLRDPKRVVYTEITPSA
VRNAIAHPRKLDTNLIGAGLCRDCLDKLVGYKGSPLVWALNNGAKSVGRVQSATLHLICQ
REREILAFVPQDYWSVWVDYQEGFRAFYKGTDNTEKETPEPETETHDDAASNNPEKPESK
RVLSEAEATRLVEEAKRHPHQIIHLEGKLVYRQPPPPFTTSTLQQAAGSKLKFSPDKTMQ
VAQKLYEAGLITYMRTDSVMLSPEFCASARQWLEQNDPENVPQQVAKQRSSKTAQEAHEA
IRPTDVFRPSVQLRAELPEDEFNLYVMIWKRAIASQCRPAQLRKTLVITKSGNILWQARG
QVIEFYGYAKYWLNLSKDAVLPLLQQGQILTLAKAGHDQKQTQPPPRYSEPKLVQLMERK
GIGRPSTYAPTIATLKKRNYVELKKDNLQPTALGLEVDEFLQKALPDLLEAEFTAKMEDA
LDAISEGKNSWQHYLTTWNQSYFVPALSKAKTVVVNSSTTAKNNNFVERKYETSKTRCPN
CKNCLAKIPSSKVKKKYFLKCVSGCENIVLFWSDFNKKWEAPKTKTSAGENAPKPSVKIT
AYPCPVCKKPLEEYSYLKDGQNKTMLRCSGQDSWKDTKHKDVAYFHTAKGWWSPKFGNLN
DLNADERR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacgtctcctagtagttgaatctcccggaaaagtcaaaaaactgagtcaaatt
ctcggtgcagattggattgtccgcgctagttgtggccatatccgcgaactcagtaacgag
ggtgatgattcactaggatttacaatggatggtaatactgttcgctgtaattatgttccc
cgtgaccaacgcgcaaaagaaacaattcaacaattaaaagccgctgttaggcaagttgat
gaagttgttttagctacagacccagacagagaaggagaaaccattgcttggcatcttaaa
gaaacgttaggattaagagaccccaaacgagtagtttatacagagattacaccatcagcg
gtgcggaatgcgatcgcacatcctcgaaaacttgacactaatctcatcggtgccggatta
tgtcgagattgtcttgataagctggtaggttacaaaggtagtcccctagtttgggcatta
aataacggggcaaaaagtgtcggtagagttcaaagcgccacattacacctcatttgtcag
cgcgaaagagaaattctggcttttgtcccccaagattactggagtgtgtgggtagattat
caagaaggatttcgggctttttacaaaggtacggacaatactgagaaagaaacaccagaa
ccagaaacggaaactcacgatgatgcagctagtaacaacccagaaaaacccgaatctaag
cgcgttctctcagaagcagaagccacaagattagttgaggaagcaaaacgtcatcctcat
caaattattcacttagaagggaaactggtttatcgtcaaccccctccaccatttaccacc
tccaccctccaacaagctgccggttcaaagttgaaattttcccctgacaaaactatgcag
gtggcacaaaagctatatgaggcaggattaattacatatatgcgaaccgattcagtgatg
ttgagtcctgaattttgtgcgagcgctcgtcaatggttggaacaaaatgatcctgagaat
gtcccccagcaagtagcaaagcagcgtagtagtaaaacggctcaggaggcacatgaagcc
attcgtcccacagatgtctttcgtccttcagtgcaattacgggcagaattacctgaagat
gagtttaacctatatgtgatgatttggaaaagagcgatcgcttcccaatgtcgtccagca
caacttcgtaaaactctggtaattacgaaatcaggtaatatcttatggcaagctagaggg
caggtaattgaattttacggttatgcaaaatattggctgaatcttagcaaagatgccgtt
ttacctttattgcaacagggacaaatcctaactttagccaaagctggacatgaccaaaaa
caaacccaaccaccacccagatatagcgaacctaaacttgtccaattaatggaacgtaaa
ggcattggtcgtcctagcacttatgctccaacaattgctactttaaagaaacgcaattat
gtggagttgaaaaaagataatcttcaacccacagctttgggtttagaagttgatgaattt
ttacaaaaggctttaccagatttattagaagcggaatttactgctaaaatggaagatgcc
ctagatgcaatttctgaaggaaaaaactcttggcaacattacctaactacttggaatcaa
agttattttgttcctgcactttccaaagctaaaactgtggttgttaattcatcaactaca
gctaaaaataataattttgttgagcgtaaatatgaaacttctaaaactcgttgtcctaat
tgtaagaactgtttagctaaaattcccagcagtaaagttaaaaagaaatactttcttaaa
tgtgtgagtggttgcgaaaacattgtgctattttggagtgattttaacaaaaagtgggaa
gcaccgaaaactaaaacatctgcaggtgaaaatgctcccaaaccttcagtaaaaatcact
gcatatccctgtcctgtatgcaagaaacctttggaggaatacagttacctcaaagatggg
caaaataaaactatgctgcggtgttctggtcaagattcatggaaggatacgaaacataag
gatgtggcttattttcatactgctaaaggatggtggagtcctaaatttgggaatttaaat
gatttgaacgcagatgaacgcagataa
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