Dolichospermum sp. UKL201: HEP80_05980
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Entry
HEP80_05980 CDS
T10192
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
doz Dolichospermum sp. UKL201
Pathway
doz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
doz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HEP80_05980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
doz03019
]
HEP80_05980
03400 DNA repair and recombination proteins [BR:
doz03400
]
HEP80_05980
Enzymes [BR:
doz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HEP80_05980
Messenger RNA biogenesis [BR:
doz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HEP80_05980
DNA repair and recombination proteins [BR:
doz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HEP80_05980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QSV53492
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All DBs
Position
1263348..1264790
Genome browser
AA seq
480 aa
AA seq
DB search
MNLPVTQSWQDVRAALKAIWGYDDFRPPQKEIVNCLISQKDSLIIMPTGGGKSICFQLPA
LLQTGLTLIVSPLVALMENQVEELRQLSRKAALLHSELTPSQRQATLQALERQQLRLLYL
SPETLLSPAVWQKLCNPQLQINGLILDEAHCLVQWGDSFRPAYRRLGAVREALLKSKPPG
TKISIAAFTATADPLAQKIISTVLKLDKPEIFRINPYRENLNPIVRIAWTPKGRKQQLLK
FIQKRPNQVGLIYVRTRRDSENLTEWLIENGFHTASYHAGLSPTERRNIEASWLGGKILF
VVCTCAFGMGINKSDVRWVVHFHAPYLLSEYVQEIGRAGRDGKPADVLTLVSEPTGFLDA
EDKQRQKFFAAQMKLQQQKAQQLAKQLPTQGEINTVIKEFPNSAVALSLLHSNGQLEWLD
PFHYSMSLQSGKPAKTQLQAAKQMSEYLTTKKCRWQFLLNAFGFETTTNWRCGHCDNCGN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcccagtaacacaatcttggcaagatgttcgcgcagcattaaaagcgatttgg
ggatatgacgattttcgtcctcctcaaaaagaaattgttaactgtttaatatcacaaaaa
gattcactaattattatgcccacaggtggggggaagtcaatttgttttcaacttcctgcc
ctactacaaacaggattaactttaatagtttctcctttggtggctttaatggaaaaccaa
gttgaggaattacgtcaactgtcacgaaaagcagcacttttacacagtgaattaactcca
tctcaacgccaggcaactttgcaagctttggaaagacagcaattaagattattgtattta
tcaccagaaactttattaagtccagcagtgtggcaaaagttgtgtaatccccaactgcaa
attaatggtttaattctggatgaggcccattgtttagtgcagtggggtgatagttttcgt
ccagcttatcggcgtttaggggctgtgcgtgaagcgttactaaaatcaaaaccaccggga
acaaaaattagtatagcagcttttacggcaacggctgatcctttagcccaaaagattatt
tctacagttttaaaattagacaaacctgagatttttcggattaatccctatcgagaaaat
ttaaatcctattgtccgaattgcttggactcctaaagggagaaaacaacaattattaaag
tttattcaaaaacgaccaaatcaagttggtttaatttatgtacggactcgaagagatagt
gaaaatttaaccgaatggttaatagaaaatggctttcatactgctagttatcatgcagga
ttaagtccaacagaacgccggaatattgaagctagttggttaggtggaaaaatccttttt
gtggtgtgtacttgtgcttttggcatggggataaacaaatcggatgtccgctgggttgtc
cattttcatgcaccctatttattatctgaatatgtgcaagaaataggcagggctggaaga
gatggaaaacccgctgatgttttaactttagtaagtgaaccaacgggatttttagatgct
gaggataagcaaagacagaaattttttgcagcacaaatgaaattgcaacaacaaaaagcc
caacaattagcgaaacaattaccaacccaaggagaaataaatactgtaattaaagaattt
cccaatagcgctgtggcactttctcttctccatagtaatggacaactagaatggcttgat
ccttttcattattctatgtctttgcagtcaggaaaaccagcaaaaacacaattacaagct
gctaaacaaatgagtgaatatcttactaccaaaaaatgtcgttggcagtttttattaaat
gcttttgggtttgaaacaacgactaattggcgttgtggacattgtgataattgtggaaat
taa
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