Dolichospermum sp. UKL201: HEP80_08525
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Entry
HEP80_08525 CDS
T10192
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
doz Dolichospermum sp. UKL201
Pathway
doz03018
RNA degradation
Brite
Enzymes [BR:
doz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HEP80_08525
Messenger RNA biogenesis [BR:
doz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HEP80_08525
Ribosome biogenesis [BR:
doz03009
]
Prokaryotic type
rRNA helicases
HEP80_08525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
UvrD-helicase
HEM4
Motif
Other DBs
NCBI-ProteinID:
QSV53914
LinkDB
All DBs
Position
complement(1809050..1810615)
Genome browser
AA seq
521 aa
AA seq
DB search
MNLSFQELGISPERATLLEGMGFTEPTNIQTQAIPQLLNGRDVVGQSQTGTGKTAAFSLP
ILERLDENLKAVQAIVLTPTRELAIQVHAAVSQFIGNSYLKAAAIYGGQSIDRQIMQLRR
GAQIVVGTPGRVIDLLDRGNLKLDQVKWFVLDEADEMLSMGFIDDVERILSQAPNERQTA
LFSATMPPSIRMLVNKFLNSPVTVTVEQPKAAPNKINQVAYMIPRHWTKAKALQPILEME
DPETALIFVRTRRTAAELTSQLQSAGHSVDEYHGDLSQQARERLLIRFRNRQVRWVVATD
IAARGLDVDQLSHVINFDLPDSVETYVHRIGRTGRAGKEGTAISLVQSFERRKQQAFERH
NRQTWQILSIPTKAQLEAQHIQKLRGQVAEALAGERLASFLPIISEMIEEYDAHAIAAAA
LQIAYDQTRPAWLISGVDLPVDESPTPKPRINKRGDGGERERSSGGGRGGRSSWSKEGRG
NDERRSSGGSGGSAKPKLKIAYNEPSSTPTNHKLGLPTGRE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatcatttcaagaattaggcatttccccagaacgggctacattgttagaaggc
atgggttttactgaacctacaaatattcaaacccaagcaattcctcaactattaaatggt
cgggatgtagttggtcaatcgcaaacaggaacaggtaaaaccgcagctttttctctacca
attttagagcggttagatgagaacctcaaagctgtacaagcaatagttttaaccccaact
cgtgaattagcaattcaagttcatgcggctgtttcccaatttattggtaacagttacttg
aaagcagcggctatttatggtggtcaatcaattgatcgtcaaattatgcaactcagacgt
ggggcgcaaatcgttgtcgggacaccaggacgggtcatagacttactagatcgtggtaac
ttgaagctagatcaagtcaaatggtttgtcttagatgaagctgatgaaatgttaagcatg
ggcttcattgacgatgtggaaagaattctttcccaagcccccaatgaacgccaaacagca
ttattttccgcgacaatgccaccatcaattcggatgttggtaaataaatttttgaactca
ccggtgactgtcaccgttgaacaacccaaagccgcaccgaataaaatcaatcaagtggct
tacatgattcctcgtcattggacaaaagctaaagctttacaaccaattctggaaatggaa
gatccagaaacagctttaatctttgttcgcacccggcgtacagcggcagaattaaccagt
caattgcaatctgctggtcatagtgtggatgaatatcatggtgacttgtctcaacaagca
cgggaacgcctattaatccgtttccgtaaccgtcaagttcgttgggttgtcgctactgat
attgcagcgcgtgggttggacgttgaccaactttctcatgtaatcaactttgatttacct
gatagcgtcgaaacctatgttcaccgcattggtcggactggtcgggctggaaaagaagga
acggcaatttctttagtacaatcttttgaacgccgcaaacaacaggcatttgaacgccat
aaccgtcaaacttggcaaattctctctattcctaccaaggcgcagcttgaagcccaacat
atccagaagttaagaggacaagtggcagaagctttagctggggaacggttagcttccttc
ttgccgattatcagcgaaatgattgaggaatatgatgctcatgcgatcgctgcggctgct
ttacaaatcgcttacgatcaaacccgtcctgcttggttaatatcaggagtagacctgccc
gtagacgaaagcccaactcccaaacccagaattaacaaacgtggtgatggtggagaacgg
gaacgtagttctggtggtggtcgcggtggccgttcctcttggtcaaaagaaggtagaggt
aacgatgaaagacgtagtagcggtggcagtggcggtagtgctaaaccaaagttaaaaata
gcctacaatgaaccctcttctactcctaccaatcacaagttaggtttacctacgggtaga
gaatag
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