Dolichospermum sp. UKL201: HEP80_11835
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Entry
HEP80_11835 CDS
T10192
Name
(GenBank) RNA polymerase sigma factor, RpoD/SigA family
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
doz Dolichospermum sp. UKL201
Brite
KEGG Orthology (KO) [BR:
doz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
doz03021
]
HEP80_11835
Transcription machinery [BR:
doz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HEP80_11835
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
C2c1_helical_1st
Rv2175c_wHTH
HNH_repeat
Motif
Other DBs
NCBI-ProteinID:
QSV54459
LinkDB
All DBs
Position
complement(2506469..2507452)
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AA seq
327 aa
AA seq
DB search
MATVKNHTENVNAKFTADMVRTYLREIGRVPLLSREQEIIYGKQVQQMMALLEAKEALRK
EIDHEPSLSEWAARVNQSETELNHLMTQGKRAKQKMIEANLRLVVAIAKKYQKRNMEFLD
LIQEGTLGLERGVEKFDPMRGYKFSTYAYWWIRQAITRAIAQQGRTIRLPIHITEKLNKI
KKVQRELAQTLGRSPTPTEIAKELELEPAQIREYLNMARQPVSLDVRVGENQDTELQEML
EDDGPSPEYYTTQEFLRHDLNNLLAELTPQQRQVVALRFGLEDGNELSLAKVGERLNLSR
ERVRQLEHQALAHLRRRRANVKEYIAS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggctacagttaaaaatcatacagagaatgtcaatgccaaatttaccgctgatatggta
agaacttatctgcgagaaattggccgtgtacctttgttaagccgtgaacaggaaatcatc
tacggtaaacaagtacagcaaatgatggcactgctagaagctaaagaagctttacgcaaa
gaaattgaccatgaacctagtttatcagaatgggctgcccgtgttaatcaatcagaaaca
gaactaaatcatttaatgacgcagggtaagcgagccaagcaaaaaatgattgaagcgaat
ttgcgcttggttgtagctattgcgaaaaaatatcaaaagcggaatatggaatttctggat
ttaatccaggaaggaactttgggattagaacggggtgtggagaaatttgatcccatgcgg
ggttacaaattctcaacctatgcttattggtggattcgtcaggcaattaccagggcgatc
gcccaacaaggtcggacaatccgtctaccaatccatattaccgaaaaactgaacaaaatt
aaaaaagttcaacgggaattagcgcaaacattaggaagatcacccacacctacagaaatc
gccaaagaactagagttagaacccgctcaaattcgtgaatatctgaatatggcgcgtcaa
ccagtttctttagatgtgcgcgtcggtgaaaaccaagataccgaattgcaagaaatgttg
gaagatgacgggccatcaccagagtattacacgactcaggagtttttgcgtcacgacttg
aataacctgcttgcagaactcacaccccaacagcgtcaagttgtagccttacgctttggt
ttagaagatggaaatgaactctctttagcgaaagttggtgaacgtttgaacctcagtcgg
gaacgagttcgtcaattagagcatcaagctcttgcacatttacgtcgtcgccgcgctaat
gttaaagaatacattgccagctag
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