Dolichospermum sp. UKL201: HEP80_11910
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Entry
HEP80_11910 CDS
T10192
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
doz Dolichospermum sp. UKL201
Pathway
doz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
doz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HEP80_11910 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
doz03019
]
HEP80_11910 (recQ)
03400 DNA repair and recombination proteins [BR:
doz03400
]
HEP80_11910 (recQ)
Enzymes [BR:
doz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HEP80_11910 (recQ)
Messenger RNA biogenesis [BR:
doz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HEP80_11910 (recQ)
DNA repair and recombination proteins [BR:
doz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HEP80_11910 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
GerE
ResIII
TnsD
HTH_36
DUF6115
Helicase_Sgs1
HTH_38
Motif
Other DBs
NCBI-ProteinID:
QSV54471
LinkDB
All DBs
Position
2519574..2521763
Genome browser
AA seq
729 aa
AA seq
DB search
MLQYPHLEQALKHHFGYDQFRPGQRQIIEDALENRDLMVIMPTGGGKSLCFQLPALLKPG
LTVVVSPLIALMQDQVEALRTNNISATFLNSSLNAYKVRSREEAIMNGKIKLLYVAPERL
VSDRFLPLLDVVKEKVGISTFAIDEAHCVSEWGHDFRPEYRQLRLLRKRYPDVPTIALTA
TATDRVRADIIEQLGLKQPSIHIASFNRQNLHYEVRSKSNRAYAELLEIVRENEGSGIIY
CLTRKKVDEITLKLQNDKVSVLPYHAGLSDEERSKNQTRFIRDDVRVMVATVAFGMGINK
PDVRFVVHSDLPRNLESYYQESGRAGRDDEPSKCTLFFNYGDIKTIEWSINQKPDPQEQL
IAKQQLRQVIDYAEGTDCRRTIQLSYFGERFPGNCGNCDNCLYPKPVQDWTIEAMKFLSC
VARCKERYGMLHIIDILRGAKNQRIVVNKHDQLSTYGIGKDKTVDEWRMLGRSLLHQGLI
EQTADGYSILKLNALSWEVMRKQRPVSIAVPIAKKITWEEGNVKAADVEVLMQKLRSLRK
ELADEQAVPPYVIFHDSTLKLMAQSQPKTLDEFGNLSGVGSHKLSQYGERFLAEIQKYRQ
EQGLQEKTINRVISSPHSHSPSDTELTTLELYNQGLSIENIAKQRNVKTATIINHISNLI
EKKQAVDLSKLVPLERQKKIWNVLEIVGDIALTPIRENLGESYSFDEIRLVRAKWRREKQ
KTIKDDIDF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagtatccccacttagaacaagccctaaaacatcattttggttacgatcaattt
cgtcctggacaaaggcaaattatcgaagatgctctagaaaatcgtgatttaatggtaatt
atgcccaccggtggaggtaaatctctgtgctttcaattacctgcacttttaaaacccggt
ttaacagtagttgtatcaccattaatagccttaatgcaagatcaagtagaagcactgcga
actaataacatttctgccacatttctgaatagtagtcttaatgcctataaagttcgctcc
cgtgaagaagcgatcatgaatggtaaaataaaattactttatgtcgccccagaacgtctc
gttagtgaccgatttctcccgcttttagacgtagttaaagaaaaagtcggaatttccacc
tttgccatagatgaagcccattgtgtctcagaatgggggcatgatttccgcccagaatat
cggcaattaagattactcagaaaacgttatcctgatgtaccgacaattgctttgactgct
accgctacagatagagtcagggctgatattatcgaacaattaggattaaaacaacccagc
attcatattgctagttttaaccgccaaaatcttcattatgaagtccgttctaaaagtaat
cgtgcttacgccgaattattagaaatagttagagaaaatgaaggttcaggaattatctat
tgtttaactcgcaaaaaagttgatgaaataactttaaaactccaaaatgataaagtttca
gttttgccttatcatgctggtttaagtgatgaggaaagatcaaaaaatcaaactcgcttt
attcgggatgatgtgcgggtaatggtagccacagttgcctttggtatgggtattaataaa
cctgatgtgcggtttgtggtgcattccgatttaccgcgaaatttagaaagttattatcag
gaatcaggacgagccggcagagatgatgaaccttctaaatgtacactttttttcaattat
ggtgacattaaaaccattgaatggagtattaatcaaaaaccagatccccaagaacaatta
atagctaaacagcaactaagacaggtaattgattatgcagaagggacagactgtagacgc
acaattcaattaagttattttggggaaagatttccgggaaattgtggaaattgtgataat
tgtctttatcctaaacctgtccaagattggacaattgaagccatgaaatttctatcttgt
gtggccaggtgtaaagaaagatatggaatgttacatattattgatatattaagaggcgca
aaaaatcagagaattgttgttaataaacatgatcaactttctacctatggaattggcaaa
gataaaacagtagatgaatggcgaatgttaggaagatcacttttacatcaaggtttaata
gaacaaaccgcagacggttattcaattttaaaacttaatgctttgagttgggaagtaatg
cgaaaacaacgcccagtttccattgctgttcctatagccaagaaaattacttgggaagag
ggaaatgtcaaagcagcagatgtagaagtgctaatgcaaaaattgcgatcgcttaggaaa
gaactcgcagacgaacaagcagtaccaccctacgtcatcttccatgattctaccctcaaa
ttaatggcacaaagccaaccaaaaaccttagatgaatttggcaatctttccggggttggt
agtcataaattatctcaatatggcgaaagattcttagcagaaattcaaaaataccgccaa
gaacaagggttacaagaaaagactattaatcgagttatttcctcacctcattctcactca
ccttctgatacagaattaacaacattggaattatataatcagggtttgagtattgaaaac
atcgctaaacaacgcaacgttaaaactgccacaattatcaatcatatctccaatttaatt
gagaaaaaacaagctgtagatttaagtaagttagtccccttagaacgccaaaagaaaatc
tggaacgttttagaaattgttggtgatattgccctcacacccattcgggaaaatctaggt
gaaagctacagttttgacgaaattcgtttagttagagcaaaatggcgcagagaaaaacaa
aaaaccattaaagatgatattgatttttag
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