Dolichospermum sp. UKL201: HEP80_12230
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Entry
HEP80_12230 CDS
T10192
Name
(GenBank) RpoD/SigA family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
doz Dolichospermum sp. UKL201
Brite
KEGG Orthology (KO) [BR:
doz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HEP80_12230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
doz03021
]
HEP80_12230
Transcription machinery [BR:
doz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HEP80_12230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
PIN_4
Motif
Other DBs
NCBI-ProteinID:
QSV54523
LinkDB
All DBs
Position
complement(2578226..2579395)
Genome browser
AA seq
389 aa
AA seq
DB search
MYQTKQPSLTETMNLAELGTMEILENITDHEEPSIESLDQVVYEDATIVENLASEERNGD
DMAAARPSGYNKTENDDAVGAFFKEMARYPLLKPDEEVELARRVRFLEEVKELQAALELE
LGAQPSKVQVASQLEITEKQLESRLYQGRVAKRKMIRSNLRLVVSIAKRYLNRGVPFLDL
IQEGAMGLNRASEKFDPDKGYKFSTYAYWWIRQAITRAIANDARTIRLPIHIVEKLNKLK
KAQRELKQKLARNPTEAEMAEALEITVHQLRQLQQLRRQALSLNHRVGKEEDTELMDLLE
DEDNQSPEAKMNENMMRQEIWEVLGDVLTPREKDVISLRYGLTSSEPCTLEEVGNMFNLS
RERVRQIQSKAMRKLRRPHIAKRLKGWLV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaaacaaagcaaccatctctaacggaaactatgaatcttgctgaattgggaaca
atggaaatactagagaatattactgatcatgaagaaccatcaattgagagtttagatcaa
gtagtatatgaagatgctacaattgtcgaaaacttggcatcagaagagcgcaatggcgat
gacatggccgcagcccgtccttcgggatataataaaaccgaaaatgatgatgctgttggc
gcattttttaaggaaatggcgcgttatcccctactcaaacctgatgaagaagtggaatta
gcgcgacgggtgagatttttagaagaagtcaaagaattgcaagcagctttggaattagaa
ctaggagcgcagcctagtaaggtgcaggtggcttcgcaattagagataacagaaaaacaa
ctggaaagccgcttgtatcaaggtagagtggccaagcgaaaaatgattcgctccaatctc
cggttagtcgtatctattgctaaacgatatttaaatcgtggtgtcccttttctcgattta
attcaagaaggagcaatgggtttaaaccgcgcttctgaaaaatttgatcctgataaagga
tataagttttctacttatgcttattggtggattagacaagcaattaccagagcgatcgct
aatgatgcccgaactattcgcttaccaatccatattgttgagaaacttaataaactaaaa
aaagcccaacgggaactcaaacaaaaactcgctcggaatcccacagaggccgaaatggcc
gaagctttggaaattacagttcaccaactgcgtcaacttcaacaactgcgtcgtcaagcc
ctgtcccttaaccaccgtgtcggtaaagaagaagacacagaattaatggatttgctagaa
gatgaagacaaccagtctcccgaagccaaaatgaacgaaaacatgatgcgtcaggagatt
tgggaagttctcggagacgtactcaccccacgagagaaagatgtcatttccctgcgctat
ggactcactagcagtgaaccctgcaccctagaagaggtggggaatatgtttaacctttcc
cgcgaacgagtccgtcaaatccaaagtaaagccatgcgaaaattacgccgtcctcacata
gccaagcgtttaaaaggttggttggtataa
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