Dolichospermum sp. UKL201: HEP80_12235
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Entry
HEP80_12235 CDS
T10192
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
doz Dolichospermum sp. UKL201
Pathway
doz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
doz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HEP80_12235 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
doz03400
]
HEP80_12235 (priA)
Enzymes [BR:
doz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HEP80_12235 (priA)
DNA repair and recombination proteins [BR:
doz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HEP80_12235 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
Hydrolase
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
QSV54524
LinkDB
All DBs
Position
2580464..2582932
Genome browser
AA seq
822 aa
AA seq
DB search
MYSIGAKSSVIAVAEPGGSYQSPAKLPEWVEVLVDCPGCSDLFTYKIPAQLAIKPGDILS
VPFGATQVGAIAIRLLTEPNLDIPLEKIREVEDVVSEGFFPPGYWTLLNRVAAYYYTPLI
LVIRVALPPGLLGRSQRRLRLTSLGKKNLAIYISPIAQQVITLLEKTPTADYSYHYIQQK
VKAAYRGIRELIRLGLAENYLEPPQLTKPKLQKAVTLLDNNHDDLTARQKEIVEVLRRQG
GEIWQSELLQLCSTSTSTLKALVDKGYIVIEDREILRREKGPAVAEDEAKSLTPAQKNAL
ETINSLTGFAQVLLHGVTGSGKTEVYLQAISPLLAQGKSALVLVPEIGLTPQLTDRFRAR
FGHKVHVYHSALSDGERYDTWRQMLTGEPQIIIGTRSAIFAPLPNLGLIILDEEHDSSFK
QDSPIPTYHARTIAQWRAELEHCPLILGSATPSLESWVSGNQLYLSLPERINSRPLPPVE
IVDMRQELKEGNRSIFSRKLQNALQQLAERQQQGILFIHRRGHSTFVSCRSCGYVLECPH
CDVSLAYHHVEEGAPELLRCHYCNYGRLHPPHCPECSSPYLKFFGSGTQRVAQELTKQFP
NLKIIRFDSDTTTTKGSHRKLLTQFANGEAHLLVGTQMLTKGLDLPQVTLVGVVAADGLL
HLSDYRANERTFQTLTQVAGRAGRGDDPGRVIVQTYTPEHPIIEAVQKHDYQSFADAELA
QRQTLNYPPYGRLILLRLSSLDPIQVQNTAQIIATFLNNKEGFEILGPAPASILRVANRY
RWQILLKFDPDALPNLPDWPEVRSLSPVSVSLTIDVDPINIM
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtatagtattggtgcaaaatcatctgttatcgctgtagctgaaccgggaggatcatat
caatctccagcaaaattacctgaatgggtggaagtgcttgtagactgtccaggatgttca
gatttatttacctataaaatcccagcacagttagcaatcaaaccaggagatattttaagc
gttccctttggtgcgacacaggtaggggcgatcgctatccgcttattaactgaaccgaat
ctagatattcccttagaaaaaattcgggaagtagaagatgtagttagtgaagggtttttt
cctcctggttattggacattactcaaccgtgttgcagcctattactatacacctctaatt
ttagtaattcgcgtcgctttaccaccaggcttattaggaagatcacaacgtcgtttacgg
ttaacttctctgggtaaaaaaaatctggctatttatattagtcctatagcccagcaagta
attacacttttagaaaaaaccccaacagcagactatagttatcactacatccaacaaaaa
gttaaagccgcatatcgcggaattcgggaattaatccgcttaggtttagccgaaaattat
ttagaaccgccacaacttaccaaacctaaattacaaaaagctgtcacacttctagataat
aatcatgacgatttaacagcccgtcaaaaagaaattgtggaagttttgcgacgacaaggg
ggagaaatatggcaaagtgaattattgcaactttgcagtaccagcacttccaccctaaaa
gccttagtagataaaggctatatagtcattgaagacagggaaatattacgtcgagaaaaa
ggacccgcagtagccgaagatgaggcgaaatccttaacaccagcccaaaaaaatgcctta
gaaacgattaactccttaactggatttgctcaagtattgttacatggggtgacaggttca
gggaaaacagaagtatatttacaagccatatcaccattactcgcacaaggaaaatccgcc
cttgttttagttcccgaaatcggcctcaccccccaacttacagatagatttcgcgcccga
tttggtcacaaagtccacgtttatcacagcgccctttctgacggtgaacgttacgacacc
tggcgacaaatgctcacaggagagccgcaaatcattatcgggactcgtagcgccattttc
gcccctttacccaatctaggcttaattatcctggacgaagaacacgatagcagctttaaa
caagattctcctattcctacctaccacgcccgcaccatcgctcaatggcgagccgaatta
gaacattgtcccctaattttaggttctgcgactccctctttagaaagttgggtaagtgga
aatcaactatatttatcattaccagaacgcattaactcgcgcccattaccacctgtggaa
atcgtggatatgcgtcaagagttaaaagagggaaatcggtctatttttagtagaaagctg
caaaatgcgctgcaacaattagcagaaagacaacaacagggaatattatttattcatcgg
cgcggacatagtacctttgtttcttgtcgcagttgtggttatgtgttggaatgtccccat
tgtgatgtatccctagcttatcatcatgtggaagagggagcgccggaattattacgctgt
cattattgtaattatgggcgtttacatcctccccattgtcccgaatgtagttccccttat
ttaaagttttttggcagcggtactcaacgggtagcgcaggaattaactaagcaatttccc
aatttgaaaataattcgctttgatagtgataccaccaccactaaaggttcacaccggaaa
cttcttacccagtttgctaatggtgaagcccatttattagtagggacacaaatgctgaca
aaagggttagatttaccccaagttacccttgtgggtgtagtcgctgcggatggattattg
cacttatctgattatcgcgccaatgaacgcacatttcaaactttgacccaagttgcggga
agggcgggaagaggggatgatccagggagggtaattgtccaaacctatactccagaacat
ccgattattgaagcagtgcaaaaacatgattatcaatcttttgctgatgcagagttagca
caaagacaaactctgaattatcctccctatgggagattaattttattgcgattaagtagt
ttagatcccattcaagtccaaaacacagcccaaatcattgctacatttttgaacaataaa
gaaggatttgagatattgggacctgcaccagctagtattttacgagtagctaaccgttat
cgttggcaaatattactcaagtttgatcctgacgctttaccaaatttaccagattggcca
gaagtgcgatcgctttctcctgtttctgtcagtttaacaattgatgtagatccgattaat
attatgtag
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