Dolichospermum sp. UKL201: HEP80_16055
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Entry
HEP80_16055 CDS
T10192
Symbol
sigC
Name
(GenBank) RNA polymerase sigma factor SigC
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
doz Dolichospermum sp. UKL201
Brite
KEGG Orthology (KO) [BR:
doz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
doz03021
]
HEP80_16055 (sigC)
Transcription machinery [BR:
doz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HEP80_16055 (sigC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QSV55167
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All DBs
Position
complement(3430169..3431404)
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AA seq
411 aa
AA seq
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MPATSFYKNAAHDGQNPSPPLDIEINNDDDLPDLDMATIESDLALAAQSTRRSTDLVRLY
LQEIGRVRLLGRDEEVAEAQKVQRYLRMRLMLSAAAAEGDAVIIPYSRLIEVQERLKAEL
GHRPSLERWATTAGISLPDLKPTLANGKRRWAEIANLTVEELEQVQTQGLQAKSHMIKAN
LRLVVSVAKKYQNRGLELLDLVQEGTLGLERAVEKFDPTKGYRFSTYAYWWIRQGITRAI
ATSSRTIRLPVHITEKLNKIKKAQRKIAQEKGRTPTLEDLGIELDMTPAQVREVLLRVPR
SVSLETKVGKDKDTELGELLETDTITPEEMLMRESLHKDLHSLLDDLTGRERDVILMRFG
LSDGHAYSLAEIGRALDLSRERVRQIESKALQKLRQPKRRNLVRDYLESLS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaacatccttttataaaaatgccgcccacgacgggcaaaatcctagtccacct
ttggatattgaaatcaataatgatgatgatttgccagatttagacatggctacgattgaa
tctgatttagctttagccgcgcaaagtaccagacgcagtaccgacttagtgcgtctctat
ctgcaagaaattggccgagtccggttattgggacgagatgaggaagttgctgaagcccaa
aaagtacagcgatacttacgaatgcgattaatgcttagtgctgctgctgctgaaggagat
gctgtaattatcccctattcgcggttaatagaggtacaggagcggttgaaagcggaatta
ggacaccgcccttctttagaacggtgggcgactactgcgggcataagtttacctgatctt
aaacctaccctagccaatggcaaaagacgctgggccgaaattgctaatttaacagtagaa
gaactagaacaagttcaaactcaaggactgcaagccaaatcccacatgattaaggcgaat
ttgcgtttagtggtatctgtcgctaaaaagtatcaaaatcggggtttggaattgttggat
ttggttcaagaagggactttaggtttagaacgagccgtggagaaatttgaccccaccaag
ggctatcgttttagtacctatgcttactggtggattcgtcaaggtattaccagggcgatc
gctacttctagccggactattcgcctgcctgttcatattaccgaaaagctcaacaaaatt
aaaaaggcgcaacggaaaattgcccaagaaaaaggtcgtaccccgactttagaagacctg
ggaattgagttagatatgacacctgcccaagtccgggaagtattattgagagttcctcgt
tctgtgtctttagaaaccaaggtagggaaggataaagatactgaattaggagaattgtta
gagactgatacgattactccagaggagatgttaatgcgggaatctttacataaagatttg
catagtcttctagatgatttaactggtcgggaacgtgatgtgattttaatgcgctttggc
ttatccgatggtcatgcttactctttagcagaaattggccgcgcccttgatttatcacgg
gaaagagtcagacaaattgaatccaaggctttgcaaaaactccgccaacccaaacgccgt
aacctagtccgcgactatctagagtcattaagttag
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