Dolichospermum sp. UKL201: HEP80_16575
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Entry
HEP80_16575 CDS
T10192
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
doz Dolichospermum sp. UKL201
Brite
KEGG Orthology (KO) [BR:
doz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
doz03400
]
HEP80_16575 (sbcC)
DNA repair and recombination proteins [BR:
doz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HEP80_16575 (sbcC)
Archaeal homologous recombinant proteins
HEP80_16575 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
AAA_15
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
QSV55251
LinkDB
All DBs
Position
3542310..3545336
Genome browser
AA seq
1008 aa
AA seq
DB search
MIPVQLIIKNFLSYRDAALDFSGLHTACICGSNGAGKSSLLEAITWAIWGESRATIEDDV
IHSGAQEVRIDFTFQSGLQTYRVIRNRVRGGTSILEFQIETPAGFRPLTGKGLKATQDVI
LEHIKLDYETFINSAYLRQGKADEFMLKRPAERKEILAELLKLNQYDELEERAKDKSKLY
RIRGEDLENSLANIKIQLQQRETTETQRAELEAQLNNLQQVQAFENIQLQSLQVIQHQRQ
SWEQQLNFVRQRYDNLNQDSDRLQQEQISVKSQLTDLEKIINQQVDIQAGYAQYQSLQSQ
EEIFAAKFEQHTRATNLKQQKQQQLYKQTQDLERQFQQAEAQLAALEQQEQEISQTLSKS
GDIETAILQLNTARQHLTNLDQLQMQVTPLLQQRASLQSQLDRTHASLVARLEQMQATEK
QLQNQHHRQPQLQQAVIEIGTQIEELDKKRVYLQRVKEKGQERRHFLERLQAHQGDYERL
LGELEQKLQMLQNPDASCPLCERPLDEHHWSKVIEKTQLEYEDTQGQFWVVREQMAVSDR
EIQVLRQEYREISQKLSGYDSLREKRGQLAAQLEATSDLQQQLLQIISEKEHLERSLETG
DYAPEKQIEIQQLDQYLQQLNYSEQDHVLARSDVDKLRWAEIKQGQIKDALKRQGQLIAR
KPELTANIAQLQLQLQQGQTDSDCAKEIANLEKQIAEIGYSSEQHNYLRQGVRQGQGWQL
RHQQLLSAQAQYPQLSHKSQDLEDSLQRIFKERETLTQQIDNMVKQLTDSANPTAQINAL
EQQLANRRRELDHKISQLGQLKQMSLQLETLQNQYEEDIQQVQICKQQQRVYQELAQAFG
KNGIQALMIENILPQLEAEANQLLSRLSANQFHVQFITQKAGRSGKSSKKNAKLIDTLDI
LIADSRGTRSYETYSGGEAFRINFAIRLALAKLLAQRAGASLQLLVIDEGFGTQDGEGCD
RLIAAINAISSDFACILTVTHMPHLKEAFQARIEVSKNQQGSQLQLLM
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgatcccagtccaacttatcatcaaaaactttcttagttaccgtgacgcagctttagat
tttagcggcttgcatacggcgtgtatttgtggttctaatggtgcggggaaatcttccctt
ttagaagctatcacttgggcaatttggggtgaaagccgtgctactattgaggatgatgtg
attcattctggcgcacaagaagtccgaattgatttcactttccagagtggtttgcaaact
tatcgggtaattcgcaaccgggtaagaggtggaactagtattttggaatttcaaattgaa
actcctgctgggtttcgtcctttgacgggtaagggattaaaagccactcaggatgtcatt
ctcgaacatattaagctagattatgagacttttattaattcagcttatttgcgtcagggg
aaagccgatgaatttatgctcaaacgtcctgctgaacgcaaggaaattttggcggagtta
ttaaaactaaatcagtatgatgagttagaagaacgcgctaaggataaatctaaactttat
agaatccgaggagaagatttagaaaattctttagcgaatattaaaattcaactccaacaa
cgggaaacaacggaaactcaacgcgctgagttagaagcgcaattgaataatttacaacaa
gtacaagcttttgaaaatattcaattacaaagtttacaagttatccaacatcaaagacaa
agttgggaacaacaattaaattttgtgcggcaacgatatgataatctgaaccaagatagc
gatcgcttacaacaagaacaaatatccgtaaaatcccaattaacagatttagaaaagatt
atcaatcaacaagttgatattcaagctggttatgctcaatatcaaagtctgcaatctcaa
gaagaaatttttgcagctaaatttgaacaacatacccgcgctaccaatttaaaacaacaa
aaacaacaacagttatataaacaaactcaagatttagaacgtcaatttcaacaagcggaa
gctcaattagcagctttggaacaacaagaacaagaaatttcccaaaccttgagtaaatct
ggggatatcgaaacagctatattacaattaaataccgctcgtcagcatttgactaactta
gatcaattgcaaatgcaggtaacaccattattacaacaaagagccagtttgcaaagtcaa
ttagatcgcactcatgctagtctagtagcgcgattggagcaaatgcaagccacagaaaaa
caattacaaaatcaacaccatcgtcaaccccaattacaacaagcagtaatagagatagga
acacaaattgaagaattagataaaaagcgagtttatctccaaagagtcaaggaaaaagga
caagaaagacgacattttctggagcgtttacaagctcatcaaggagattatgaaaggtta
ttgggggaactagaacaaaaattgcaaatgttacaaaatcccgatgctagttgtccttta
tgtgaacgtcctctagacgaacatcattggagtaaagttatcgaaaaaactcaattagaa
tatgaagatacccaaggacaattttgggtagtgcgggaacaaatggcagtttcagatcgg
gaaattcaggtactcagacaagaatatcgagaaatatcccaaaagttatcaggttatgat
tcattgcgagaaaaacggggacaattagcagcacagttggaagctacaagtgatcttcaa
caacagttactgcaaattatttctgaaaaagaacatttagaacgttctttagaaactggt
gattatgcaccagaaaaacaaatagaaattcagcaattagatcaatatctccagcaactt
aattatagtgaacaagaccacgttcttgcccgtagtgatgtagataaattacgttgggca
gaaattaaacaaggacaaattaaggatgccttaaaacgccaaggacaattaatagctaga
aaaccagaattaacagcgaatattgctcaattacaattgcaactgcaacaaggacaaact
gattctgattgtgcgaaagaaatcgctaatttagaaaagcaaattgccgaaattggctat
agttcagaacagcataattatctgcgtcaaggtgtgcgacaagggcaaggttggcaatta
cgtcatcaacaattattatcagcacaagcacaatatcctcaattaagtcataaaagtcaa
gatttagaagattcattgcaaagaatattcaaagaacgagaaacattaactcaacaaatt
gataatatggttaaacaattaaccgacagtgcgaacccaacagcccaaattaatgcttta
gaacaacaattagcaaaccggagacgggaactagatcataaaatatctcagttgggacaa
ttaaaacaaatgtctctgcaattagaaactttgcaaaatcaatatgaagaagatatccaa
caggtgcaaatttgtaaacaacaacagcgtgtttatcaagaattagctcaagcttttggc
aaaaatgggattcaagctttaatgattgaaaatattttaccccaattggaagcagaagct
aatcaattactttctcgattgagtgcgaatcaatttcacgtccaatttatcacccaaaaa
gcgggacgcagtggcaaatcaagtaagaaaaatgctaaattaatagatacattagatatt
ttaattgctgattccagaggaacaagatcctatgaaacttattcaggaggagaagctttt
agaattaactttgccattcgtttagctttagccaaattattagcgcaaagagcaggagcc
tcattacaattattagtaatagatgaaggttttgggactcaagatggggaaggatgcgat
cgcttaattgccgcaattaacgccatatcctctgattttgcctgtatcctcactgtaacc
catatgccccacctcaaagaagccttccaagcccgaatcgaagtgagtaaaaaccaacaa
gggtcacaattacaattattaatgtaa
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