Dolichospermum sp. UKL201: HEP80_18175
Help
Entry
HEP80_18175 CDS
T10192
Name
(GenBank) VacB/RNase II family 3'-5' exoribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
doz Dolichospermum sp. UKL201
Brite
Enzymes [BR:
doz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
HEP80_18175
Transfer RNA biogenesis [BR:
doz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HEP80_18175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QSV55512
LinkDB
All DBs
Position
3889667..3891727
Genome browser
AA seq
686 aa
AA seq
DB search
MDKGTLVEFRVKGDRRLGVIDRPDGKTSWFVVDERGQSHNIKNNQFTYTVNGQTYKPGEI
AEFLSQVQPYLDPSSLEVAWELLIEDGETVTPSQLANLLFSESTPPQCYAAHCLLSEDKL
YFKQKGDAYEPRSAAQIAERKHQIQVESQKAKGQQEFLARIEQALQGQVVEWQRLDRQRL
DALEKYATLLADVVMLKINYDSLARACPPPISVLETMNMLGRSATPQAAFQLLIDLGLWT
SHENLFLRRSSISVQFPHQVLEVAQECWDFPPTDLDTNRLDLTHLKVYTIDDESTTEIDD
GLSWEILADGKERLWVHIADPTRLLMPDDELDLEARKRGSTVYLPTGMIPMFPEVLATGP
MSLIQGKVCCALSFGVILDAVGAVEDYCIHTGLIKPTYRLTYQDVDEMLELGVQAEPEIE
AIANWAKIRKTWRYSQGAISINMPEAMIKVKDDDINIDVLDDSSSRQLVAEMMILAGEVA
ARYGQTHNIPLPFRGQPQPELPPEEELLLLPAGFVRSCAMRRCMPKSEMSITPVRHAGLG
LDTYTQATSPIRRYSDLLTHFQLKAHLRGEGLPFSAEQLKEVMMTVSSITQEATMVERQT
NRYYALEYLRRHPEQVWQVTVLMWLREDSNLGLILLEDLGLQLPMSFRRSVSLGENLLVK
VSLADPQKDMIHFQEIMYQEAQSVTN
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtggataaggggacgttagttgaatttagggttaaaggcgatcgccgtcttggagtgata
gatcgtccagacggtaaaactagttggtttgtagtagatgaacgtggtcaatcccataac
atcaaaaataaccaatttacctacacggttaacggacaaacctataaaccaggggaaatc
gctgagtttttaagtcaagttcagccttatctagacccatcaagtctggaagtagcttgg
gaactactgattgaagatggagaaactgtcactcctagccaattggcaaatctgctattt
tcggaatccacacctccccagtgttatgcagcccattgtttgttatcagaagataaactc
tatttcaaacaaaaaggagacgcttacgaaccccgcagcgcggcgcaaatagcagaacgc
aagcaccagattcaagtagaatcacaaaaagccaagggacagcaggaatttttagcccgg
atagaacaggcgctccagggacaagtggtagaatggcaacgactggatcgccagcgttta
gacgcattagaaaagtatgcgactttgctggcggatgtggtgatgctaaaaataaattac
gactctttagctcgtgcttgtccgcctccaatctcagtattagaaactatgaatatgctg
ggacgttctgctacgccccaggcggcctttcaactcttgatagatttgggtttgtggact
tcccacgaaaacctgttcctgcgccgttcatcaatttccgttcaatttcctcatcaggta
ttagaagtggcgcaagaatgttgggattttcctcctacagatttagatacaaaccgtctc
gatctcacacatctcaaggtatataccattgatgatgaaagcactacagaaatagacgat
ggtttgagttgggagatattagcagatggtaaggaacggttatgggtgcatattgctgac
ccaacgcggttattaatgccagatgatgaattagatttagaagccagaaaacggggtagt
acagtgtatttacccacggggatgattcccatgttcccagaggtgttggccacaggtccc
atgagtttaattcaggggaaagtctgttgcgccctcagttttggggtgattttagatgca
gttggggctgtggaagattactgtatacacactggtttaattaagcctacctaccgcctc
acctatcaagatgtggatgagatgctggagttgggagttcaagcagaaccagaaattgag
gcgatcgctaattgggcaaaaatacgcaaaacttggcgttatagtcaaggtgctatcagt
atcaatatgcccgaagcgatgatcaaagtcaaagacgatgatatcaatattgatgtttta
gatgattcttcctcccgccaattagtcgcagaaatgatgattctcgctggcgaagttgcc
gcccgttacggacaaactcataatatcccgctgccctttcgcggccaaccccaaccagaa
ttacctccagaggaagaactgctcctgcttccagccggttttgtccgttcctgtgcgatg
cgccgctgtatgcctaaaagcgaaatgagcattacaccagtgcgccatgctggtttgggt
ttagatacctacactcaagctacttcccccattcgtcgttatagcgacttactcacccac
ttccaattaaaagcacatttacgcggcgaaggtttacccttctctgctgaacaactcaaa
gaagtgatgatgacggttagcagcatcactcaagaagcaacaatggtggaacgacaaact
aacagatattacgctttagaatatttacgtcgtcatcctgaacaagtttggcaggtaacg
gtattaatgtggttacgagaagatagcaatttaggactaattttattagaagatttgggt
ttacaattgcctatgtccttccggcgttctgtcagtttgggagaaaatttattagtgaaa
gttagtttggctgatccccaaaaagatatgattcacttccaggaaattatgtatcaggaa
gcccaatcagttacgaattag
DBGET
integrated database retrieval system
