Dolichospermum sp. UKL201: HEP80_22425
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Entry
HEP80_22425 CDS
T10192
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
doz Dolichospermum sp. UKL201
Brite
KEGG Orthology (KO) [BR:
doz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
doz03032
]
HEP80_22425 (topA)
03400 DNA repair and recombination proteins [BR:
doz03400
]
HEP80_22425 (topA)
Enzymes [BR:
doz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HEP80_22425 (topA)
DNA replication proteins [BR:
doz03032
]
Prokaryotic type
DNA Topoisomerases
HEP80_22425 (topA)
DNA repair and recombination proteins [BR:
doz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HEP80_22425 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QSV56174
LinkDB
All DBs
Position
complement(4736657..4739299)
Genome browser
AA seq
880 aa
AA seq
DB search
MSTLVIVESPTKARTIRNYLPKDYVVEASMGHVRDLPQSASEIPAAVKGEKWAQLGVNVE
ADFEPIYVVPKDKKKIVTQLKEALKGVTELILATDEDREGESISWHLYQLLKPKVPTKRM
VFHEITKEAIQKALKDCRNIDEQVVRAQETRRILDRLVGYTLSPLLWKKIAWGLSAGRVQ
SVAVRLLVIKERQRRAFHEGTYWDLKASLEQEKSPFSAVLVTLGGTKVATGSDFDSTTGR
ITAGRNVVLLNEEQAEALKARLEGKTWTVADMEERPVTRKPAPPFTTSTLQQESNRKLRL
SARDTMRVAQNLYEQGYITYMRTDSVHLSDQAITAARACVEQKYGKQYLSPQPRQYTTKS
KGAQEAHEAIRPAGSSFRTPQDTGLGGREFAVYDLIWKRTVASQMADSRQTQVTVQIQVE
DAGFRSSGKRIDFPGYLRAYVEGSDDPEAALEDQEVILPALKVGDHPKCNELEAVGHETQ
PPARYTEATLVKTLESEGIGRPSTYASIIGTIIDKDYAQLVNNALIPTFTAFAVTDLLEK
HFPDIVDPSFTSKMEQTLDEISTGEAQWLPYLKKFYLGEQGLETLVKERETEIDASKART
VELENLDAKVRIGKYGPYIEVTNGEEVITASIPKNLTPADLNPKQVEILLKQKISGPDQL
GRHPETGEPIYIKLGTYGPYVQLGDKTEENPKPKQASLLKGVTPETVTLDMAVGLLSLPR
ALGTHPETGGKVQASLGRFGPYVVHDQGKEGKDYRSLKSTDDVLTISLNRALELLAEPKK
GRAAAKSKSKEALRELGTHPEDESPVNIYDGPYGPYIKHGKTNASLPEGESVENITLSTA
IELLSAKASTKSPRKTTKSTTKSTATKSTTTRGKKKDAAS
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactcttgttatcgtcgaatctcccacaaaagctcgtaccattcgcaactaccta
ccaaaagactatgtagtagaagcttcaatgggtcatgtccgtgaccttccccagtcggcc
agtgaaattcccgcagccgtgaaaggggaaaaatgggcgcagcttggggtcaatgtagaa
gccgactttgaaccgatttatgtcgttcccaaagacaaaaagaaaattgtcactcagctt
aaagaagccctcaaaggcgtaactgaactgattttagccacagacgaagaccgggaaggg
gaaagtattagttggcatttataccaattgctcaagcccaaagtgccgacaaagcgcatg
gtatttcatgaaattaccaaggaagctattcaaaaagctttgaaagactgccgtaatatt
gatgagcaggtagttcgcgcccaagaaaccagaagaattttagaccgattagtaggatat
accctatcaccgctactgtggaaaaaaattgcctggggattatccgctgggcgagtgcaa
tctgtagcagtacgcttattagtaattaaagaacgacaacgccgggctttccatgaaggt
acatactgggatttaaaagccagtctagaacaggaaaaaagtccctttagcgcggtttta
gtgactcttggcggtacgaaagttgccacaggcagcgattttgactcaaccactggcaga
attaccgccgggcgtaatgttgtattactcaacgaggaacaagccgaagccctaaaagcc
cgcctagaagggaaaacttggacagtggcggatatggaagaacgtcccgtcacccgcaaa
ccagcaccaccgttcacaacttccacactgcaacaagaatctaaccgcaaattgcgctta
tcggcacgggataccatgcgggttgctcaaaatttatatgagcaagggtatattacctat
atgcggacagattcggtacatttatccgaccaagcgattaccgccgcccgtgcttgtgta
gaacaaaaatacgggaaacaatatcttagtccccaacctcgccaatacaccaccaaatct
aaaggcgcacaagaagctcacgaagccattcgtcccgctggtagcagtttccgcacaccc
caagatactggcttaggtggccgagaatttgctgtttatgatttgatttggaagcgcacc
gtcgcctcacaaatggctgattctcgccaaactcaagttactgtgcaaatccaagttgaa
gacgctggttttcgttcctctggtaagcgcatagattttcctggctatcttcgcgcctat
gtcgaaggttcggatgatcctgaagccgctttagaagaccaagaagtaattctacctgct
ctgaaagttggtgatcatcccaaatgcaatgaactggaagcggtaggtcatgaaacccaa
cctcccgcccgttacaccgaagcaactttggtgaaaaccttagaaagtgaaggtattggt
cgtcctagtacctacgccagtattattggcacaatcattgataaagattatgcccaattg
gtgaataatgccctaattcccactttcacggctttcgctgtgactgatttactggaaaaa
cattttccagatattgttgaccctagttttacttctaaaatggagcaaaccttggatgaa
atttccacgggtgaagctcaatggcttccctacttaaagaaattttatcttggtgaacaa
ggtttagaaactttggtgaaggaacgggaaaccgaaattgatgccagtaaagctagaact
gtagaactagaaaatttagatgctaaagtccgcattggtaaatatggtccttatatcgaa
gttaccaatggtgaggaagtaattaccgcttctatccccaaaaacctcaccccggctgac
ctgaaccccaaacaggtggaaatcctcctcaaacaaaaaatttccggacctgaccaactc
ggtcgtcacccggaaactggagaaccaatttatatcaaacttggtacttatggtccttat
gttcaattaggcgataaaactgaggaaaatcctaagcctaaacaagcttctttactcaaa
ggtgtgacaccggaaaccgtcactttagatatggctgtgggtttattatctctcccccgt
gctttgggaactcaccccgaaactggtggcaaagtccaagctagtttaggaagatttggc
ccctatgttgtccatgaccaagggaaggaggggaaagattaccgttctctaaaatctacg
gatgatgtcttgacaatttccttgaatcgtgctttagaattattggcagaaccgaaaaaa
ggacgggctgctgctaagagtaagtctaaagaagctttacgcgagttgggtacgcatcca
gaagatgagtcaccagtcaatatctatgatggtccctatggtccttacattaaacatggg
aaaactaatgccagtcttcctgaaggtgaatcagtagaaaatatcacgctatctacagct
attgaattactttcagccaaagcatctacaaaatctccccgcaaaaccactaaatcaact
actaagtcaactgctactaaatcaactactactagaggaaaaaagaaagacgcagcaagt
tag
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