Dendroctonus ponderosae (mountain pine beetle): 109533125
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Entry
109533125 CDS
T04899
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109533125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpa04121
]
109533125
Enzymes [BR:
dpa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
109533125
Ubiquitin system [BR:
dpa04121
]
Ubiquitin ligases (E3)
HECT type E3
109533125
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
HEAT_2
Motif
Other DBs
NCBI-GeneID:
109533125
NCBI-ProteinID:
XP_048518529
LinkDB
All DBs
Position
Unknown
AA seq
2098 aa
AA seq
DB search
MADPANSFAAASTSRKRALRSQLRAEAKRLRTASQVDFSSQSSQTRPSAASGSKVKPAKS
KTSASEKTHLDPRSKSQEDLAGPTNSHKVSYSTRSARSDSAAAASLLDVGDAERSTRKRL
LSRNSSPEPDSAPASKIPVLSRNASTHRNKTKSKAEEEKPSRSRSKKGEKGLKRELEASD
ESARAHKSRKGGFSGVEDVGASTSANHTYPQIRKYSLRSSSRLSSSASLSSSALDTPSTK
PPPNPSTQAHQPWKRIASGKGQQAALGASASSASTSRSSKAHSAPNLAPDPPEQFRLTRS
GAVLRRVTRSSKGQSGTSTTTGSCASSSSGGAATASGRRSASGGGNSSRSHKSSGANTAQ
AQPPPPLLPAPVSGARTMAADQSHPNLSSAGLQLNSEEPPSAVEGAQSMASSGQGRLHVH
DSGPGVDSESDDSEVGRLQALLEARGLPPHLFGALGPRMQHLLHRSMGSNSSVAKAQALL
PGLEAIGDEGQQLQAVIEMCQVLVMGNEEVLTGFPVKQVVPALIALLQMDHNFDIMNHAC
RALTYMMEALPRSSSVVVDAVPVFLEKLQVIQCMDVAEQSLTALDMLSRRHSKSILQARG
VSACLTYLDFFPINAQRNAFSVTANCCLNLTSEEFQYVQESLSLLASRLTQQDKKCVESV
CLAFSRLVDSYQLEPVRLQEIASAELLTNLQQLLVVTPPLISTGTFITVLRMLSVMCANC
PDLALTLLKQSIAETLLYLLTGSGEVNQDNVELVSRQPQELFEITCLIGELMPKLPTDGI
FTVDALLERPISVAKDQPVWQWRGDRGWWHPYGPVDSRIIESAHQNGDDEVSLNTLGRIY
TVDFHSMQQINEDTGTSRAVQRLFTPSSNKASTSEPAHSTNRPSSASRDARVACLRKERG
LAAAFIRSLFCVLYEVYSSSAGPAVRCKCLKALLRMVYYATPELLKDVLKNQVVSSHIAG
MMASTDLRIVVGSLQMAEILMNKLPEEFGTHFRREGVLHQVNRLADPEVPLGASPPKSAT
CSATSFASSMESQPSTSQTCTSFQLTANGSAAMASLSAGVDLLSATPNMQRVQEGDGRSP
SPTVRLGDVLKRKRTGKRSGASGGGSRSKTRQDDLPISPSLVQDFFSKAASLANSTTSST
LAASQRPRYSGSSSKTSFLQNLNPARWGRNTNSSHERNYTKDSLNNLSKSASNSHITAGN
REKTRTWIREQANKFIDSYSNQADEQHPATTVLTRLKLAIDKLPTGKCAEALLELREILI
ESDISPFEVNYSGLIKALLSYLADLVGPFDRDQRIRIMLNVFADMPLESNVREIENINST
WMRALVAKLNGCVSQLEQFPVKVHDLPANSGAGRGGTSALKFFNTHQLKCNLQRHPDCNN
LKQWKGGTVKIDPLALVQAIERYLIVRGYGRLGDKDTTESDDGDSDTDIDDTLAGVTISQ
TGNKHKLQFVIGNTVLPYNMTVYQAVRQFSNNGNDQSETDTDNETPLGNAGIWVQTHVIY
YRPLREEVADQNHRSGSGSGLTWNHSSRKGKGVSGKSTSRRKGVDLWNEVIAGITPPAQS
PLAPYLSTQLPDSVAVQDASLEVLCLLRILHAVNLYWGALYPHVEYRPILAATEFINPKI
AAKASRQLQDPLVIMTGNLPNWLHQIATSCPFLFQFETRQLLFYATSFDRDRALQRLLDM
APELSSSDSQERVTPRLDRRKRTISREDILKQAEQMLQDLAGSKALLEVQYENEVGTGLG
PTLEFYALVSKELQKHNLDLWYAPNATQSESEYVHNQMGLFPAPVARGVKLGPITKVKSK
FRFLGKFMARAVMDSRMLDLPFSLTFYRWLLGHEHCLTLADLKHVSPDIYSTIRKMQDVV
RARDEILQNSALTEEEQSELVEKLEFDGCLIDDLGLVFVVPGYNVELIKNGKNTHLTIHN
LHVYVQVLTHWLLHEGVARQMEALREGFNSVFPSQNLCIFQPDELEQVFCGSPKDHVAGW
DVKTLMDCCRPDHGYTADSKAIRFLFEVLSSYDREEQRMFVQFLTGSPRLPVGGFKALSP
PLTVVRKTLEPNMNPDDFLPSVMTCVNYLKLPDYSSMEVMRLKLGIAASEGQHSFYLS
NT seq
6297 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccagctaacagtttcgctgctgcaagcactagccgcaagcgtgcgctgcga
tcgcagctgcgagccgaggccaagcgccttcggactgcatctcaagtggacttcagttct
cagagcagccaaactcgtccatcagctgccagcggcagcaaagtaaagcctgccaaatct
aagacttccgccagcgagaaaactcacctggatccccggtcgaaatcccaagaagacctt
gccgggcctacaaactcccataaagtctcttattccaccaggtctgcgcgctccgattcg
gctgctgcagcttcgctgctagacgtaggggacgcggaacgctctaccaggaagcgactc
ttatctaggaatagcagtccagagcctgatagtgcgcctgcttcgaaaattccggtcctt
tcccgaaacgccagcactcaccgcaacaaaaccaagtcaaaggccgaggaagagaaaccg
agccgcagcaggagtaaaaagggcgagaaaggcttgaagcgcgagttagaggcgagcgac
gaaagtgcaagagcacacaagagcaggaagggaggatttagtggtgtcgaagacgttggt
gcaagtacaagcgcaaaccatacatatccacaaattcgtaaatattcactgcgcagcagc
tcacggctctcgtcaagtgccagcttgtcttcttcggcgctcgacactccatcaactaag
cctccaccgaacccatccactcaagcgcatcagccctggaaaagaattgcatcgggaaaa
gggcaacaagcagcgctgggtgcatcggccagcagtgcctccactagcagaagcagcaag
gcgcattcggccccaaatttggcgcctgatcctccagaacaattccggctcaccaggagc
ggtgctgtgttgaggcgagttaccagaagcagcaaagggcaaagcggcacgtcaacaaca
acgggttcgtgtgccagctcgagcagcggaggggccgcgacggccagcggccgacgctcg
gcgagcgggggcggcaactccagcaggagccacaagagcagcggcgccaacaccgcccaa
gcccaaccaccgccccctttgctaccagcgcccgtttccggggctcgaactatggcggcg
gatcagtcccatccaaatctatccagcgcaggactacaattgaattcagaagagccgccg
tcggcagtagaaggggcccaatctatggcgtcgtctggtcagggtcggctccatgttcac
gattccggacccggagtcgattctgagagcgatgatagtgaagtgggtcggttgcaagct
ctgcttgaagctagaggactgcctccgcatctgtttggggcgctcggtccgcgcatgcag
catcttttgcaccgtagcatgggatcgaacagttctgtggccaaagcccaggctcttctt
ccggggctggaagccataggagacgagggacaacaacttcaggctgtgatagaaatgtgc
caagtgctggtaatgggcaacgaggaagttttaacgggatttccagtcaagcaggtcgtt
cccgctctaatcgcactgctgcaaatggatcacaatttcgacattatgaatcacgcttgc
cgtgctcttacctacatgatggaggctctacccaggtcttcatcagtggtggtggacgcg
gtgccagtgtttctcgaaaaactacaagtgatccaatgcatggatgtggccgaacagtct
ctaaccgctctcgatatgctgtccagaagacattcgaaatcgattttacaagctcgtgga
gtatctgcctgcttaacttacctggattttttccccataaatgctcaacggaacgcgttt
tccgtaactgccaactgttgcctgaacctcacctccgaagagttccaatacgttcaggaa
tcgttgtctctcctcgcttcaagactgactcaacaggataaaaaatgtgtcgaaagtgtg
tgtttggccttttcccggctagtcgacagttaccaattggagcccgttagactgcaggaa
atcgccagcgctgaattgcttaccaatctgcagcagttgcttgttgtaactcctcccttg
attagcaccgggacttttataacggttttgaggatgctgtcggtgatgtgcgccaactgt
cccgatctggctctaaccttgttgaagcaaagcatagccgagacgcttctgtacctgctc
accggctctggcgaagtgaaccaggacaatgtagaattggtctccagacagccacaggag
ctcttcgagatcacctgcctgattggggaactgatgccgaaattgcccaccgatgggata
tttaccgtagacgcacttctcgaaagaccgattagcgtggcgaaagatcagcccgtttgg
cagtggcggggcgacagaggatggtggcacccgtatggtccggtcgacagcaggattatt
gagagcgcgcatcagaacggagacgacgaagtcagcctgaacactctgggcaggatttac
acggtcgatttccattcgatgcagcaaatcaacgaggacactggcacgtctagagcggtt
cagcgtctcttcacgccttccagcaacaaggcaagcacgtccgagcccgctcactccact
aatcggcccagttcggccagccgcgatgctcgtgtcgcttgcctgcggaaggaacgcgga
ttagctgcagcgttcattaggtctttgttttgcgttttatacgaagtctactcatcaagt
gcagggccggcagttcgctgtaagtgcctgaaagctcttctgcgaatggtgtattacgca
acgccggagctactgaaagatgtgctgaagaaccaagtggttagcagccatatagcgggc
atgatggcctcgactgacctccgaatcgtggtgggttcgctgcaaatggccgagatcctg
atgaacaagctgcccgaagagtttggcactcatttccgacgggagggagttttgcatcag
gtgaacagactggccgatccagaggttcctctcggcgccagtcctcccaaatcagccacg
tgcagtgcaacttcttttgccagcagcatggaatctcaaccgagtacttcgcagacgtgc
accagctttcagttaactgctaatggttccgctgcaatggcgtcgctttcagcgggtgtt
gatcttctgagtgccactccgaatatgcagcgcgttcaagagggagacggtcgatcgcca
agcccgacagtgcgcttgggggatgttctgaaacggaaaaggactggcaaacggtcgggt
gcatcgggcggcggcagcagatcgaagaccaggcaggatgatttgcccatttccccgtca
ctggtgcaagatttcttcagcaaggcggcttctctggccaattcgaccacctcgtccaca
ttggctgcaagtcaacgtcccagatattccggttcgtcgtcgaagaccagttttctgcag
aacctcaacccggcaaggtggggcaggaatacgaactcttcacacgagaggaattacacc
aaggactcgctcaacaatctttccaagtctgcctccaattctcacattactgccgggaat
cgggagaagacgcgaacatggattcgcgaacaggccaacaagttcattgactcttattct
aaccaggcagacgagcagcatccagccaccacagtgcttacgcgcctgaaactcgccatc
gataagttgccaaccggaaaatgcgccgaagctctgctagaattgagggagattctcatt
gaatccgacatttcaccgttcgaggtcaactactcgggccttatcaaggcgctgctctca
tacctagccgatctggtcggccctttcgatcgggaccaaagaatcaggattatgctgaat
gtgttcgccgatatgcctttagagtccaatgtgcgtgaaatagaaaacatcaattctaca
tggatgcgggctttggtagccaaattaaatggttgtgtgtcccaactggaacagtttcca
gtcaaagtgcacgatctgccagccaattcgggcgccggccgaggcggcaccagcgcattg
aagttcttcaacacgcaccaactgaagtgcaatctgcagcgccatccggactgcaacaat
ttgaagcagtggaaagggggcacggttaaaatcgaccctctagcgctcgttcaagccatt
gaacggtacttaattgtaagaggctatggccgattgggtgataaagatacgactgagagc
gatgatggagattcagacacggacattgacgatactttggccggtgtgaccatatcgcag
actggcaataaacacaaattgcaatttgttataggtaatacagttcttccatacaatatg
acggtgtatcaggctgtgagacagttttcaaataacggcaacgatcagagcgaaacggac
acggacaacgagacgccactgggaaatgccgggatctgggtccaaacccatgtaatatat
tataggccattaagggaggaagtggctgatcagaaccaccgaagcggttccggcagcggc
ttaacttggaaccactctagtcgcaagggcaaaggagtatccggaaagagcacatcaagg
cgaaaaggtgttgatttgtggaatgaagttattgcaggtataactcctccggcacagtcg
ccgctcgccccatacttgagcacgcaacttccggattcagtggcggtgcaagacgcttct
ttagaggtgctttgcctgttgcgaatactgcacgcggtcaatctgtactggggcgcactt
tatccgcacgtggaataccggccaatattggctgcgactgaatttatcaatcctaagatt
gcagcgaaagcaagccgacagctgcaagatccgctggtgattatgacgggaaatttgccc
aattggctgcaccagatcgccacctcttgcccgttcctgttccaatttgagacgcgccag
ttattgttctacgcgacttctttcgatcgcgatcgagcccttcaacgcttgctggatatg
gcgcctgagttaagctccagcgactcacaggagcgcgtcactccgcgtctggatagacga
aagcggacgatatctcgcgaagacattctgaagcaagcggaacaaatgctgcaggatcta
gccggatccaaagccctattggaagtgcaatatgaaaatgaagtgggcaccggattggga
cccaccttggagttttacgcgttagtctcgaaggaactgcaaaagcacaatttagatctg
tggtacgctccgaatgccacgcaaagcgaaagcgagtacgtgcacaaccagatggggctg
tttccagcgccggtggcgcgcggcgtcaagttgggacccatcacgaaagtgaaaagcaaa
tttcgatttttgggcaagtttatggctcgggctgtaatggattctcgcatgcttgatttg
cccttttccctaacgttctaccgttggctgttgggacacgaacactgcttaacattggcc
gatttgaagcacgtcagtccggatatttactcaaccatccgaaaaatgcaggacgttgtg
agagcgcgagatgaaatcttgcaaaacagcgctttaaccgaagaggagcagtccgaactg
gttgagaagctggagttcgacgggtgcttaatcgacgatttaggcttggttttcgttgtg
cccgggtacaacgtggaattgatcaagaatgggaaaaacacccatctaacgatacacaat
ctgcacgtgtatgtgcaagttttaacgcattggttgctgcacgagggcgtggcccgtcaa
atggaggcgctgagggaaggattcaattccgtgttcccgtcgcagaatttgtgcattttc
cagccggacgagctggagcaagtgttttgcggcagtccaaaggatcacgtggccggttgg
gatgtgaagactctgatggattgctgccggccggatcacggctatacggccgactccaaa
gccattcggttcttgttcgaagtgctcagttcatacgatcgcgaagagcagcggatgttt
gtacagtttttaactggaagtcctcgattacccgttggaggttttaaagcactgtcccca
ccactgacagtggtgcgcaaaactctggaacccaacatgaacccagacgacttcctgcct
tctgtgatgacctgcgtgaactacctcaagctcccggactactcgagcatggaggtgatg
cgccttaaactcggaatcgccgcatcggaaggccagcactcgttctacttgtcgtaa
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integrated database retrieval system
