Dendroctonus ponderosae (mountain pine beetle): 109533204
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Entry
109533204 CDS
T04899
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 2
KO
K15047
heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpa03041
]
109533204
03400 DNA repair and recombination proteins [BR:
dpa03400
]
109533204
Spliceosome [BR:
dpa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
109533204
DNA repair and recombination proteins [BR:
dpa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
109533204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_33
SAP
AAA_18
cobW
AAA_22
AAA_7
AAA_16
Motif
Other DBs
NCBI-GeneID:
109533204
NCBI-ProteinID:
XP_019754022
UniProt:
A0AAR5NZI1
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MDPEKLKVVDLRKELQQRCLDTKGNKAVLVKRLKEALDAEAGKGKPIKTDPSEITDSIQH
ELTVKVEPLKDPKTPKKTPLKDTPTTTVKTPVATPEKSVIEPVIKSEELITPEKDIKVEL
QTPLPITQNVKEVSKTPEKVVKLEPQTPAPLATAIQVETSTDQQPENVDDQEVVEESVAM
ETETRGEKRKREDDDEDVESIEKKRREDSPVKSPEKPLDQSSSKPEVKSPPIVEALKIPI
KEDEPEIDYEKPQLSWFDSDLHLNIDKETFLSAKPLNDGCFGYIWAGARATHGISSGKIC
FEVKITEELKWDDMTEKMLDKSVVKDKYKIDRRKDKDQPKLTDTKNDTEKQEEDKPKEDV
PDDTQTEELSKDEKEQNGDCNETKEETSNNDLKSETAEPSDEVSKDAEKTEESKDEVAQV
EQAASEVTKFEPIPSHYFRVGFSLAGTSLQLGEAPHSFAYESTGRFVTNNDYQEYGSTFG
IGDVVGAYLSIDNENAIITFTVNGIAQPTAITVPRSEFPEDLALFPHVLCRNYAYELNFG
ANETPWFPHPEELKDYEFLQDVQDKVSGPKRPDKREECEVILMIGLPGSGKTHWVKNYLE
SNPDKKYTIIGNNALFDRMTVDGQTLKSRFNGSWKILVDRAQKCLNLLTDKGSLRRRNYI
IDQTNLFPNAQRRKLRSFEGFKRKAVIVVCEDDEHARRQKDQQNDFGKIVPESTMYDLKA
QMEIPQTCEWIDEMIFTDLDEEEARKKVKAYNEEASKKGYFRRWQNNRRPQQRSFRLGDR
RGGFPGSRFERYPPGRGGFNRPAPYPGRRDLRPSRPTHINPWRHHPRGPRLPDATRNREN
RNSGFGGVRNQSALRNQGARNAGVWQNSAGGSNNWGSGHQGGWNSSMYQGFNSAWNDANT
ANQQSAWKYGGNQSGYNNSGRYGNQANYGNYQGYQGSHQGYGAQIGYGSNQGGYGSQGNY
GGQQGYGQQNWNYGPYGQQQGWGSQKRK
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggatccggagaaactcaaggttgttgatttacgcaaagaattgcagcaaagatgtttg
gatacgaaaggaaataaggcggtgcttgtaaaacgcttgaaagaggctttggatgctgaa
gctgggaaaggtaaacccataaaaacggatccgtcagaaattactgatagtattcaacat
gagctgacggttaaagtagaaccgttaaaagatcccaaaactccaaaaaagacacccctt
aaagatactcccacgacaactgtgaaaacaccagtagcaactccggaaaaatctgtaatt
gaaccagtcattaaaagtgaagaacttataactccagagaaggatataaaggtggaactg
cagactcccttgccaattacacaaaatgtcaaagaagttagcaaaactccagaaaaagtt
gtcaagttggaaccccaaacacctgcaccacttgcaacggctatacaggttgaaacttcg
acagatcagcaaccggaaaatgttgatgatcaggaggttgtggaagagagcgtggcgatg
gaaactgagacaagaggtgaaaagagaaaacgcgaagacgatgatgaagatgttgagtcc
attgagaagaagcgtagggaggattccccagtcaaatctccggagaaaccccttgatcaa
tcttcgtcaaaaccagaagtaaaatcacctccaattgtggaagctttgaagatacccatc
aaagaagatgaaccggaaattgattatgaaaagcctcagttaagttggtttgactctgac
ttgcatcttaacattgacaaagagacattcttgtcagccaaaccgttgaatgacggttgc
tttggatacatttgggctggggcccgagccactcacgggatttcttcaggaaagatttgc
ttcgaggttaaaattaccgaagaacttaagtgggatgacatgaccgagaaaatgcttgat
aagtcagtagttaaggataaatataagatcgatcgccgcaaggacaaggaccaaccaaaa
ttaacggatactaaaaatgacacagaaaaacaagaagaagacaagccaaaagaagatgtt
cccgatgatacacaaacagaggaactgagcaaggatgaaaaggagcaaaacggggactgc
aacgagactaaagaagaaacgtccaataacgatctgaagtcggaaactgcggaaccatct
gacgaagtttcaaaagatgctgaaaagacagaagaaagtaaagacgaagtagcacaggta
gagcaggcagcctccgaagtcactaaattcgaacccataccgtcccattactttcgtgtc
ggattttctttggccggcacatctttgcaattgggcgaagcgccacattcattcgcatat
gaatccactggaagatttgtcactaacaatgattatcaagaatacggaagcacctttgga
attggcgacgtggtcggcgcttacttgagtattgataacgagaacgcaattatcacattt
actgtcaatggtatcgcacaacccaccgctatcacggtccctaggtcagaatttccggaa
gacttggctttatttccgcatgttctatgtagaaattacgcatatgagcttaatttcgga
gctaatgagacaccatggtttccacatccggaggaattaaaggattatgaatttctacaa
gatgtgcaggataaagtgtctggaccaaaaaggcctgacaaacgggaagagtgtgaggtt
attcttatgattggattgcctggatctggaaaaacgcattgggtgaaaaattatcttgag
tcaaatccggataaaaaatacacaataattggaaataatgcattgtttgatagaatgacg
gtggatggtcagacgctaaaatcgcgttttaacggttcctggaagatactggtagatcgg
gcgcaaaaatgtctaaatctgctaactgacaaaggatctctgcgacgacggaactatatt
atagatcagacgaacttgttcccgaacgcacagcggcgcaaactgcgctccttcgagggt
ttcaagagaaaggctgttatagtagtttgcgaggacgatgagcacgcccgtagacaaaag
gaccagcagaacgactttggtaaaatagtacccgaaagcaccatgtatgatcttaaagct
caaatggaaattccccaaacatgtgagtggattgatgaaatgatattcacggatttggac
gaggaagaagcaaggaaaaaagtgaaggcttataatgaggaagccagtaaaaagggatat
ttccgaagatggcaaaacaatagaaggccgcaacaaagaagctttagacttggtgatagg
agaggcggttttcctggaagtcgatttgaaagatacccacctggaagaggcggctttaac
aggcctgccccatatcctggcaggagggatttgagaccaagtcgtccaacgcatattaat
ccatggagacaccatccaagaggcccaaggctgccagacgcaactcgaaaccgggaaaat
cgcaactctggttttggtggtgttcgtaatcaatcggctcttcgtaatcaaggcgcacgc
aacgcgggtgtctggcaaaacagtgctggaggttccaataactggggctccggccatcaa
ggaggttggaattcttcgatgtatcagggcttcaattctgcttggaacgatgcaaatact
gcgaatcaacaatccgcttggaaatatgggggcaatcaatccgggtataataatagtggc
cgatacggcaatcaagcgaactacggaaattaccaaggctaccaaggaagccatcaagga
tatggcgcgcaaattggttatggatcaaaccaaggcggatacggctctcaaggaaattat
ggaggtcagcagggatatggacaacaaaactggaattatggtccgtacggtcaacagcag
ggttggggcagtcagaagagaaaataa
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