Dendroctonus ponderosae (mountain pine beetle): 109533228
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Entry
109533228 CDS
T04899
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa04140
Autophagy - animal
dpa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109533228
04148 Efferocytosis
109533228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpa04131
]
109533228
Membrane trafficking [BR:
dpa04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109533228
Hops complex
109533228
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_16
zf-C3HC4_2
zf-C3H2C3
zf-RING_11
zf-RING_Vps41
zf-C3HC4
zf-RING_UBOX
zf-RING_2
DUF1664
zf-RING_5
4HPAD_g_N
Motif
Other DBs
NCBI-GeneID:
109533228
NCBI-ProteinID:
XP_019754048
UniProt:
A0AAR5NYM0
LinkDB
All DBs
Position
Unknown
AA seq
989 aa
AA seq
DB search
MTSLFDQLEQVSLRTKGSSDLSSLGVMDVLLDEEPAIFTKSKKDFTPLDKVTHVVIANKF
MVLAMANNVLFRMNLHSPSERNEISLNKYTQGKLTNLFLDPTGNHLFLTFASKSKSTEMP
ELMYLSRKSDKIKTSGKFRGNEFTAIGWNNMNESDSTTGPILLGTSKGLIFETEISLEGD
KFFAPSLEQYWRQLPNYLPLYGNKEVDGLVFDIGKNSNTPVTTLEYFQVPGTNKYMIFAA
TPSRLYYFYGSAEMEEKPVLQQVFQKYLNVPETDIFLASESRLGYSRLQFWSENLITPNQ
FAWVTEKGIYFGQIDDLKDNRIATVKDKVSLLPYPKPLYEDYSQSPKYPIAIALTEFHIL
LAYTDSIKGMCLLSKEVVYEDQYNEAFGKLVSVIRDSRTGDIWALSENAMFRFKVHREER
NIWQIFCANNQFDLAKKYSRGNEVCYNQVLLKEADMLFEQKEYILSAQRFAEAQSSFEEI
CLKFLKVDEPDSLKIFLRNKLSALDPKQKTQITMLVVWVVELYLTKLEEIRLQGLEKSAS
YDEVQKQFETFIALQEVADCIRSNKSTIYELMESHGDKGNLIKLTIVSKDFERLIRHHIF
KNNFRDALEVLKSQNNFELYYQFAPVLMQEVPKPLVNTLIDQGKKLGPLRLLPALVSCNG
ELHSLEVIRYLEFCIVKLKNADKAIHNLLVSLYAKYDSKKLMEYLNSQGQEVSLINYDVY
FALRLCAEQQQNEACVKLYALLNLWESAVDLALKVNLELAKTMADMSPENDLELKKKLWL
KIAQHVVSEKNDIQEAMKYLSDLIKIEDILPFFSDFLTIDHFKDAICNSLREYNQKIQAL
KEEMEEATNSAEQVRNEIHSFRNCFTYINSADKCEVCNMILMVRPFYFFPCNHMFHSDCL
LAELEPCLGMTKRNRLSDLEKQLESLNTQSNSDNNSTGLSGMTRRDQVKAEIDNIIASEC
LYCGENMIRNVDKPFIEDFEYESITREWQ
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtttatttgatcagcttgagcaagtttcactgagaactaaaggatcatcagat
ttgtcaagtcttggggtaatggacgtgcttttggatgaagagcctgcaatttttacgaaa
tctaaaaaggattttacacctttagataaagtaacacatgttgttattgccaataagttt
atggttctggcaatggcaaacaatgttctgtttagaatgaacttgcatagtccttcagaa
agaaatgaaatctcattgaataaatacactcaaggaaagcttaccaatctctttctagac
ccaacaggaaatcatttattcttaacgttcgcctctaagtctaagtccacagaaatgcca
gagttgatgtacttatcaagaaaatctgataaaattaagactagtggcaagtttaggggt
aacgagtttactgcaattgggtggaataacatgaacgagtctgatagcactacaggccct
attttacttggcacatcaaaagggctaatttttgaaaccgaaatatcacttgaaggagac
aaattctttgcacctagtttggagcaatattggagacaacttcctaattatctacccttg
tatggtaacaaggaagtcgacggattggtattcgatattggaaaaaacagcaacactcca
gtaaccactttggaatattttcaagtgcctggtactaataagtacatgatatttgcggcc
acgccctcaagattatattacttttatggatccgctgaaatggaagaaaaaccggttctt
caacaggtgtttcagaaatatctgaatgttcccgaaactgatatatttctggcatctgaa
agcaggttgggctattcgcggttacaattctggtctgaaaacttaataactccaaatcaa
tttgcatgggtaacggaaaagggaatttacttcggccagatcgatgatttaaaagacaac
cgaattgccactgtaaaggacaaggtttctcttctaccttatcccaagcctttatacgaa
gactattcccaatcgccaaagtacccaattgctattgctttaacagaatttcacatttta
cttgcctatactgatagtattaaaggaatgtgtttactcagcaaagaagttgtatatgaa
gatcaatataatgaagcctttggaaaattggtcagtgttataagagattctagaacagga
gatatatgggcgttatcagaaaacgcaatgtttcgttttaaagtgcaccgtgaagaacgc
aatatttggcaaattttctgtgccaataaccaatttgatctagcgaaaaaatattctaga
ggaaatgaagtttgttataatcaggttctactaaaggaagctgacatgttgtttgaacaa
aaggagtacattttgagtgcccaaagatttgcagaagcgcaatcatcttttgaagaaata
tgtctaaagtttctgaaagtggacgaaccagattccttaaagatttttctacgaaataaa
ctgagtgctttggatccaaaacaaaaaactcaaattaccatgttagtggtctgggtggtg
gagctttatttgacaaaattagaagaaattcggttacaaggcctggaaaaatccgccagt
tatgacgaggttcaaaaacagtttgaaacttttatcgcacttcaagaagttgctgattgt
attcgtagcaacaagtccaccatttacgaattgatggagagtcacggagataagggcaat
ctcatcaagttaactatcgtaagcaaggattttgagcgactgattcgccatcatattttc
aaaaacaacttccgcgatgctttagaggtattaaagagtcaaaacaactttgagctctac
tatcaatttgccccagttttaatgcaagaagtgccgaaacctttggttaacactctcata
gatcagggcaagaaattgggccctcttcggctattacctgctttggtatcttgtaatgga
gaattgcattctttagaagtcatcaggtatctagagttttgtatcgttaaattgaaaaat
gccgacaaggctatacacaatttattagtctcattatatgctaaatacgactcaaagaaa
cttatggaatacctcaattcacagggtcaagaagtgagcttgatcaattacgacgtatat
ttcgctttacgactctgtgcggagcaacagcaaaatgaagcctgtgtaaaactttacgct
ttactaaacctgtgggaatcggctgtggatttggctcttaaggtaaatttggaattggca
aaaactatggctgacatgtctccggagaatgacctggaattaaaaaagaaactgtggctt
aaaatagctcaacatgtcgttagcgagaagaacgatattcaggaagctatgaaataccta
agcgatctaatcaaaatcgaagatatactgccgttcttttccgacttcttaactattgac
cattttaaagacgcaatttgtaattcacttagagaatataatcagaagattcaggctttg
aaggaagaaatggaagaagcaaccaattccgcagagcaagtgcggaatgaaattcattcg
tttcgtaattgttttacatatataaacagtgcagataaatgcgaagtttgcaatatgatt
ctaatggtgagaccattttatttttttccctgcaaccatatgtttcattcggactgttta
ttggctgaactagagccctgtcttggaatgactaagagaaatcgactttccgatttagaa
aaacaattggaatctttaaatactcaatcgaactctgataacaacagcacgggcttatca
gggatgacaaggcgtgatcaagtaaaagcagaaatcgataatattatcgcttcagagtgt
ttgtattgtggagaaaatatgatacgaaatgtcgacaaacccttcatagaagattttgaa
tatgaatctatcaccagggagtggcaataa
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integrated database retrieval system
