Dendroctonus ponderosae (mountain pine beetle): 109533817
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Entry
109533817 CDS
T04899
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa04013
MAPK signaling pathway - fly
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04013 MAPK signaling pathway - fly
109533817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpa03000
]
109533817
Transcription factors [BR:
dpa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109533817
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
DUF5763
Motif
Other DBs
NCBI-GeneID:
109533817
NCBI-ProteinID:
XP_019754827
EnsemblRapid:
LOC109533817
LinkDB
All DBs
Position
Unknown
AA seq
1297 aa
AA seq
DB search
MDMGVRKLPKKRKFDPSELDEGGQPNSCIAVSVVQTLPNVTTTEYPYNQQKVPPAPPPVD
LSEWCDHRVLAKQGDWYLPGVIRDAGVDSITVVLDEKGERKRYENVFDSDCYNVIGDASP
SVNQITLGTRVCVRQNQSIFVEGIVCTILDGQPIRFVVAVIGEKSYELRVKRADLRLLRP
PWWDELEHLELSTNQQNDYGRSSTTTLHTPVSACTPLSNGRMYDEFCESEDELKQEGFST
EEAKLSGGSKRSSMHSRGSSSSSVTPSQPATPHKYKKGDVVSNPNGIRKKYNGKQWRRLC
SKPNCNKESQRRGYCSRHLSQKGNGLRGTFPRAGSKQDGEDTSRDSETSPNAQDRRVTGR
FDQEETDVANMLVSLGSSRSATPAAFSPGTAGSPVARLGGVPSPVTVGPRQNVFLPIGGG
APAYPPYHQPVIRPELVRPVQTAQSVIRVSPRPRPWGNINSIENAQALQHNSPVEERVVT
LAPHTSGSLYIVPQHQDQKNLIVIKNVMNGRIDEAKSPQRRVIQSDHMRSAQPAVIVHPT
QLVPILPAAPQSRSVPAGVIVTPEQAIESSSPQQTTSNLIQSSQVGSPASAFAVPWHAIV
PILSGGSGIHAGTISPNSNDISETDIADHEVVPTPPDDEDDDDVFESESGDSSGGMEIGR
TSTTPQRRTQSMSALHGRDAKNNKERIRRPMNAFMIFSKRHRGLVHQRHPNQDNRTVSKI
LGEWWYALGPVEKKKYHELATEVKEAHFRAHPEWKWCNKDRRKSSTGSGRSKLSSTGECD
IPVSPGQTERQVDDEDDDHLVIADPLSLEIDLKCKEKVTDSDSESHYEADGPPQSSGAFN
TATATSSNHLSYFQPRGSHFKTVPYSPQSIKTEDIQSSQPSTPTTAFSTVGNGSSLAILK
PAMSAKATSDNYQSPLTVLIGNGTNLCISEASSDRQPFVMQVSSSASSDMPLQCVYVQPP
TYDPSRLSLQLMPKVTASSAPPHSVIVSQPSRVVAAVDTPKREPLFYQKSKVKCPSLEDD
TNAQDDGGGEFKLAPTPAQLGRAPLQRRQSMAVSIPSQGSAEGSPDLQSPCAKKSFFKRN
IEDGMDNILFHRVLETVNFEAKFSSLPRFQPCDGQSPSAISIPSPSLFNCGNLRRRGPPL
TAPARGPEEDLSSATEAPLSLPSAHPVAGTHFFGPDFSLENIRELQEADEGASPSPRTPR
TPGTKDPDKGHRRTLEQRRQLVMQLFKDHSIFPSSKATSMFQAEHSDIFPTRGTLQLKIR
EVRQKLMAQNNQLTPLTPSPGPQSAGPHEPLKVSSNS
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atggacatgggggttcgtaaactgcccaaaaagcgaaaatttgatccttcagaattagat
gaaggtggacaacctaacagttgcatagcagtctcagtagttcaaaccttaccaaatgtt
acaactactgagtatccttataatcaacaaaaagtacctcctgcacctccacctgttgac
cttagtgaatggtgcgatcatagagtgttagctaagcaaggtgattggtatcttcccggc
gtaattagggacgcaggagtagattccattacagtagttctcgatgagaaaggggagcga
aaacgatatgaaaatgtgtttgacagtgattgttacaatgttattggtgatgccagcccc
tcagtaaatcaaataactttgggtaccagagtttgcgtccggcagaaccagagtatattt
gttgaaggcatagtatgcacaattctggatggtcagccaatacggtttgtagtcgcagta
attggtgagaagtcttatgaactaagagttaaaagagctgatttacgtctattgcgaccc
ccatggtgggatgaactcgaacacttagaattatcgacaaatcaacaaaatgactatggt
cggtcatcaacaactactcttcatactcctgttagtgcatgtactccattgtctaatgga
aggatgtacgatgagttttgtgaaagtgaagatgagttaaaacaagaaggttttagcact
gaagaagcgaaactttcggggggaagcaaaagaagtagcatgcacagcagagggtcatca
tctagtagtgttactccaagtcaaccggccactccgcacaaatacaaaaagggagatgtt
gtttctaatccaaacggtattcgaaaaaagtataatggaaagcagtggcgtagattgtgt
tcgaagccaaattgcaataaggagagccagagacgaggctactgttctcgtcatttgagc
cagaaagggaatgggcttagaggaacatttcctagagctgggagcaagcaagacggtgaa
gacacttccagagattctgaaacatctccgaatgctcaagatcgacgagtaactggacga
tttgatcaagaggaaactgacgttgcaaatatgttagtatcattaggaagctcacggtcc
gcaactcctgctgcattttcccctggtacggctggctctccagttgcccggcttggagga
gtgccgtctcccgtaactgtaggtcctaggcagaacgtgtttttgccgatcggtggtgga
gctccagcctatcctccctaccatcaaccagtaataagacctgaattggttcgaccagta
caaactgctcaaagcgttattcgagtgtctcccaggccgaggccatggggcaacattaac
tcaatagaaaatgcgcaagctttacaacacaattcccctgttgaggagagggttgttaca
ttagctccacatacttcagggtcattatacatagtccctcaacaccaagaccagaagaat
ttgattgttattaagaacgtgatgaatggcagaatagacgaagctaaatctccacaaaga
cgagtgatacagagtgatcacatgcgaagcgcccaaccggcagtaattgttcatccgact
cagcttgttccaattctgcctgccgctcctcaatctagatcagtacctgctggtgtaatc
gttacccccgaacaagccattgagtcgtcatctcctcagcaaaccacttccaatctgata
cagtcttctcaagtcggtagtcccgcgtctgcttttgcagtgccctggcacgcaatagtt
ccaatattgtccggtggcagtggaatacacgctggaaccatctctcctaatagcaatgat
atatctgagactgatattgctgatcatgaggtggttccaactcctcccgacgacgaagat
gacgatgatgtctttgaatctgaaagcggtgacagttcaggaggtatggaaatcggaagg
acttcaaccacaccgcagcgaagaacccaatctatgagcgcattacatggcagagatgct
aagaacaataaggagaggatacgaagacctatgaatgcctttatgattttctccaagcgt
cacaggggattagttcatcaacgacatcccaatcaagacaatcgcaccgtgtcaaaaatc
ttaggtgaatggtggtacgctttgggcccagtggaaaagaaaaaatatcacgaactagcc
actgaagtcaaagaagctcactttcgggcgcatccagaatggaaatggtgtaataaggat
aggaggaaatcatctacaggatccgggaggagcaaattgagttcaacaggagaatgcgat
attccagttagccctggtcagactgaacggcaggttgatgatgaagacgacgatcacttg
gttattgccgatcccctgagtctagaaattgacttgaaatgtaaagaaaaagttactgat
tccgactctgagtctcattatgaagctgatggccctccacagtcaagcggcgctttcaat
acagctactgccacttcgtcgaaccatttgtcatattttcagccacgaggaagccatttt
aaaacagtaccttattctcctcaatcaattaaaacggaagacatacaatcttcacaacca
agtacaccaacaacggctttttcaaccgttggaaatggatcatcactggcaattttaaaa
ccggcaatgtcagctaaggctacatcggacaattatcaatcgccgttaacagttctaata
gggaatggtacgaacttatgcatcagtgaagcatcttcagatagacaaccatttgttatg
caagtttcttcctcggcttcttcagatatgcccttacagtgtgtttatgttcaaccgcca
acttatgatccttctcgcttatcactacaactaatgcctaaagtcacggcctctagtgct
ccaccacattcagtaatcgtgagccaaccttccagagttgtagccgctgttgatacgccc
aaaagagaacctctgttctaccagaaatctaaagttaaatgtccgtctctagaagatgat
acaaacgcccaagacgatggtggtggtgaattcaaattggctcctaccccagcccaactt
ggtcgagcacctttgcaaagacgtcaatccatggcagttagtataccttcacaaggaagt
gctgagggaagcccggacctgcagtcgccttgtgccaagaaaagtttcttcaagcgaaat
attgaagacggaatggacaatatcctcttccacagagtgttggagactgtaaatttcgaa
gccaaattttcgtcccttcctcgattccaaccatgtgatggccaatcaccaagcgccatt
tccattccaagtccttcattgtttaattgcggaaacttaagacgaagggggccgccttta
acggcacctgcaagaggccccgaagaagatcttagttctgcaactgaagctcctttatct
ttgccttctgctcatcccgtagcaggtacgcatttcttcgggcccgatttttctttggag
aacattagggaattgcaggaggcagatgaaggggcttccccttcgcctcgtactccgcgc
actcctggaactaaggaccctgataaaggtcatagaagaacattagaacaaaggcgtcaa
ttagtgatgcaattgtttaaagatcactcgatctttccgtcgtctaaagctacttccatg
ttccaagcggaacattctgatatttttccaacgagaggcactttacaacttaagatacgt
gaggtacgacagaagctaatggcgcaaaataatcaattaactcctcttactcccagcccc
ggaccacaatcagctggacctcatgaaccattaaaggtatcctccaacagctag
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