Dendroctonus ponderosae (mountain pine beetle): 109534318
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Entry
109534318 CDS
T04899
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109534318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpa03009
]
109534318
Ribosome biogenesis [BR:
dpa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
109534318
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
PEP5_VPS11_N
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
TFIIIC_delta
Beta-prop_WDR35_TULP_N
B-prop_COPA_B_2nd
WD40_like
Beta-prop_IFT122_2nd
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
109534318
NCBI-ProteinID:
XP_019755495
UniProt:
N6UGQ3
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MPRQSRKRKILQSSDQIESAPREKIRINKTGLLGNGGSVDLFANPAVFLGHFDAPGPANP
DSGIDSGSAEDSDGQEQKKPAWFDEDDQGIEVGEALAVQGRRLPAGGINDSRNKYSQLLE
HKFEAIAGTPTWARLGKAKAEVSDSEDEDDEIFHTVGFINKTRRTTLPAGSLEFKQVKDL
NCETYTEGPFINSVEFHPTSSVGLVAGNKGVATLFAVDGKKNNKLHSVAFEGFPIMCAKF
VKNGEEAILGSNRKHIFVYDLIEARSVRYNLPSGMTQCKKFTVSPDSKYFAVAGKWGDVH
LLSAASKEKIITLKQDSEVTALEFNSTGSMLFAHSDTSEVTIFDINMRRVKHKFSDEGCL
QGSAVAAASSNQFLACGSAQGVVNLYGMEDVLQSNLPKPRRSIFNLTTSISGLKFNSSSE
ILALTSTDIKNSAKLFHVASGTVFKNFPAFQSKLGHLNCINFTPGSGFLALGNRQSVVSL
FRLKHFKNY
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcctagacaatcccgtaaacgcaaaatcctccaatcgagcgaccagatcgaatcagca
ccccgtgaaaaaatccggatcaacaaaaccgggctgttgggcaatgggggctccgttgac
ctgtttgccaacccggccgtttttttggggcattttgacgcacctggccctgcaaatccg
gactccgggatcgacagcggctcggccgaagacagcgatgggcaggagcagaagaagcca
gcatggttcgatgaagatgatcagggcatcgaggtgggcgaagccctagcagtacaggga
cgccgcttgcctgccggtggaataaacgacagcaggaacaaatactcgcagttgctggag
cacaaatttgaagccattgccggcacaccaacatgggcccgcctgggcaaagccaaagca
gaagtttcagattcagaggatgaggatgatgagatatttcacactgtgggttttattaat
aaaacgcgaaggacgacattgcccgcaggctcgttggagttcaagcaagtcaaggattta
aactgtgaaacttacacggaagggcccttcatcaattcagtggagttccatcccacttcg
agtgtgggcttagtggcaggcaacaagggggttgcgaccttgtttgcagttgatggtaag
aagaacaacaagctgcacagtgtggcctttgaagggttccccatcatgtgcgccaagttt
gtgaagaatggggaagaggctatcttgggctccaatagaaaacacatattcgtctacgat
ctgatagaggccagatctgtacgctacaatctgccctctgggatgactcagtgcaagaaa
ttcacagtttccccggattccaaatactttgcggtggcaggcaaatggggcgacgtccat
ttactatccgccgcctccaaagagaaaattatcaccttaaaacaagactccgaggttaca
gcgctggagttcaactccacaggaagcatgctgtttgcccactcagatacctcagaagtt
accatcttcgacatcaatatgaggcgcgtgaaacacaagtttagcgacgaaggctgcttg
caaggatcggctgtagctgccgcctcctccaaccaattcctagcctgtggatctgcccag
ggcgtcgtcaatctctatggaatggaagatgtgctgcagagcaatcttcctaaacccagg
aggagcatcttcaacctcaccacttctatttcaggcctgaagttcaactcttccagtgaa
atcctagcactcacttccacggatattaaaaactccgccaagctgttccatgtggccagc
ggcacggtttttaagaacttcccagcttttcagagcaaactgggccatttgaactgtatt
aatttcacgccaggaagcggctttttagctctgggcaaccggcagtctgtagtttctctg
tttaggcttaagcacttcaaaaactactga
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