Dendroctonus ponderosae (mountain pine beetle): 109534322
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Entry
109534322 CDS
T04899
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpa04131
]
109534322
Membrane trafficking [BR:
dpa04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109534322
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
C1_1
PDZ_2
RGS
SOS1_NGEF_PH
PH
PH_13
C1_2
zf-RING-like
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
109534322
NCBI-ProteinID:
XP_048525123
LinkDB
All DBs
Position
Unknown
AA seq
1646 aa
AA seq
DB search
MPNMNNNNFNSSSPRPTSGNGSPGSWTSPLSSPVGMGRPPSLMDHPHSLPNAVRVVVTRD
AGGYGMKVSGDNPVYVQSVKDGGPAEKAGLHAGDKIIQVNGTNVTHSTHTEVVGLIKAHA
QVVLTVQPRMPLVRSPSTRPASLPSSTKITAPQPVDNEKQHQLQQEKEQYYRLMIEKEQH
HLDKLRSEVGSNEKRYIELAKAEKNLRCLQDNLTRTLTEQLSPESQSNRPISSPSNLGSP
IKRSESDDPPPIPKRYKHHDINSLFLSNEINSNSPKRENVSGDVPPPLPPRTYPPYNTHT
DDASAANSIDKQMSYPLVATCTSLHSDYLSQGGKHHRTKSNPDCLTNDGSGEQRHPATPP
GTPPPPYPSPDSARRFHMLGGDSFDGSFSFPNNDAFAQERSVSQNSHARPTNSRTAQQAI
ISMEDDDISDLEIDQVEDHGYFKSLSRLWEHLPHLAVFMNYILSNSDPNSLLFYLLTDLY
KEGNAKEMRKWAFEIHSCFLVPGAPLRLNNVDENIAREIDDNLTKQYDKEEIMRKIFWKA
RQRAKEELTRQLADFQQKRTAGLGTMYGPTDQELMDHYNDKAKETKLYESLLLPKVDPYL
EDMEKFEPQKYYMGAALFTILTRVFRVRPQNFDLDKVPTFVNKERSFKAKLIGKYSRKSS
RHLSHQFVDQQYFTVMACNLCHQIIYGISPQGYQCTACLINLHRSCVKLYDDSCPGPIRG
KERGIRKLIGMRHDMSEQIRHRKASQLTQMEREKRQMEEKDCINEIIETGKFSQSIYSLG
RAGESKVSQPVSRTGSDRRPDAVREEGARPAEDSNSHQQADGSLNHTETSVEKKESMSQD
NSASSQAGAKRRAGGHINRSESVKEQSEKIRKQQRRNISDPSHSTNTSSYDVENERQADL
SKNTDSGSSSNSSISAVNGRLSESPSNSMDVHQATVRTQSDSDSDMDGEADPLNWQELVT
DEELKKLNTSEKKRQEVINEIFLTEASHVRMLKVLYKLFYKKLVSSQILKPDEINLIFPN
IKELLDVHTEINKELRRKRKEDPLVRQIGDTLLATFTGPQGEQLQKAAASFCERQQLALE
LIKKRRERDNKFDSLLCECEKKRQCRRLELQSIVPYEMQRITRYPLLLERLVESVEAAEK
TCSEYKDELVKLREAHLHSKAILGFVDEAAKLAHNRHRLEEIQRHLDVSNFKNSDHPIVN
DFRNIDLTRYKLILEGGLQLRRPNKANVHVHVLLMEEMVVIFQKESEKFILKFFQSGSST
PMAPLSPIIKMNTLLARENAVCKNALFLVNTSTTSSQMYDLQAEDESKRETWLKHFTDAA
AAYNRREDKITRTTGSISITQPVTDSDSESILREASREPEPVVESADRLSSSFTTAEKED
ANQPAETAAGEDDAVSVEDPQAGGDHTPGIKESDVTSGGGGIHVTTKVSAEEWPLIQPSQ
VSVAVPPVHTAESKLTPLEQIRRKDALVKQTLAEKDDLVADLLAIPREDFQHIADMASTA
SSNADSHSLDITDRLLATVFQVDILQRAVNDALNITEGDVIAARGGKVPICASQEGATET
RSVIPSVPAGLVGEIAASLSSQLTTLLSEIKHVEEDRDRLRKELHKIREQLHEEHHLHSP
VPFEDALDPDESAQEIFCEAISDDPN
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatatgaacaacaataatttcaattcgagctcgcccaggccaacttctggtaat
ggtagtccaggctcctggacctctccgctttccagtcctgtgggaatgggccggccccct
tccttaatggatcatccccatagtcttccaaatgccgtccgagtggtggttactcgcgat
gctggcggttatggcatgaaagtatccggcgataatccagtctatgtgcaaagtgtcaaa
gatggtggaccagctgaaaaggcaggattacatgcaggcgacaaaataattcaagtgaac
ggcaccaacgttacgcattcaacccacaccgaagtagtcggtctaatcaaagcccatgct
caagtggtcctcacagtgcagccaaggatgcctttagtgcgtagccccagtaccagaccc
gcaagcctcccatcgagcacgaaaatcaccgcccctcagccagtcgataatgagaagcag
catcagctgcagcaggagaaggagcagtactatcggctgatgatcgaaaaagagcagcat
catttggataagttgcgcagcgaagttggatcgaacgaaaagaggtacatcgagctggcc
aaagcggagaaaaacctcagatgtctccaggacaatctcactaggacgttgactgagcag
ctgagtccagagtcgcaatccaatcgtcccatttcctcgccgagcaatctgggatctccg
atcaaaaggtcggagtcggacgatccgccgcccatccccaagcgctacaaacaccacgac
atcaactcactgttcctttccaacgaaatcaactcaaactcacctaaacgagagaacgtg
tctggtgatgttcctcccccgttaccacctcgtacttacccaccttacaacacgcacaca
gacgacgcatcagcggctaattcaatcgataagcaaatgtcataccctttagtggccact
tgcacttctttgcatagtgactacttgtcgcagggtgggaagcatcaccgcaccaagtct
aatccagattgtctgactaatgacgggagtggagagcagcgacatccagccactccgcct
gggaccccgccgcctccttatcccagtccagactctgctagaaggtttcacatgctgggc
ggcgactcttttgatggctccttcagtttcccgaacaacgacgcgttcgcacaggagcgt
tcagtgtcgcagaactcacatgccaggccgacgaattcgcgcacagcccaacaggcgata
atcagcatggaagacgacgatatttccgatctagaaatcgaccaagtggaagatcacggg
tacttcaagtcgttgtcgcgactgtgggagcatttgccccatctggccgtattcatgaac
tacattctgtccaactccgatccgaacagtttgcttttctaccttctcaccgacctctac
aaggaaggcaatgccaaagaaatgcgaaagtgggctttcgaaatccattcctgcttcctg
gtgccaggagcgccgctgaggttaaacaatgtggacgagaacatagcgagagaaatcgac
gataacttaaccaaacagtacgacaaggaggaaataatgcgcaagattttttggaaagcg
cgccaaagagcgaaggaggagctcacacggcaactggccgattttcagcagaaaaggacg
gccggtttgggaacaatgtacgggcccaccgatcaagaactgatggatcactacaacgac
aaagccaaagaaaccaaactgtacgagagcctgctgttgcccaaagtggatccgtacttg
gaggacatggagaagtttgagcctcaaaagtactacatgggagcggctttgttcaccatc
ctaaccagggtgtttcgggtgcggcctcaaaactttgatctggacaaagtgccgacgttc
gtgaacaaagagcgctccttcaaagccaaactgattggcaaatactccagaaagtcgagt
cgtcatttgagccatcagttcgtcgatcagcagtactttactgtgatggcgtgcaactta
tgccatcagattatctacggaattagtccccaaggatatcagtgcacagcgtgtttgatc
aatctacatcgttcctgtgttaaactttatgacgactcctgtcccggcccaatcagaggc
aaggagcgaggcatcaggaagctgattgggatgcgtcacgacatgagcgagcaaatcagg
cacaggaaggcatcccagctcactcaaatggaacgggagaaaaggcaaatggaggaaaaa
gactgcatcaacgagatcatagagaccggtaagttttcccaaagtatttactcgctagga
cgagcaggtgaatcgaaagtgtcgcagcctgtatcgaggactggatcggatcggcggccg
gacgccgttcgtgaagaaggtgcccggcctgccgaagactcaaacagccatcagcaagcc
gatggatctctaaaccacacggaaaccagtgtggagaaaaaggagtcgatgtcgcaagac
aattctgccagctcacaggcgggcgccaagcggcgggctgggggccacattaaccgatct
gagagcgtgaaggagcagtctgaaaagatcagaaagcagcagcgcaggaacatcagcgat
ccctcccattcaacaaacaccagcagctacgatgtggaaaacgagaggcaggccgattta
tccaaaaacaccgactctggcagttcgtccaactccagtatatcggccgtcaatggcagg
ctgtcggaaagtccgtccaatagcatggacgtgcaccaggccacggtgcgcactcagtct
gactctgactccgatatggatggggaggctgatcctctgaactggcaggaattggtgact
gacgaagaactaaagaaactaaacacgagcgaaaagaagcggcaggaagtaatcaacgaa
atcttcctgacggaggcctcccatgtgcgaatgctgaaagtcctgtacaagctgttttac
aaaaagctggtctccagccagatactgaagcccgatgagatcaatctaatatttccgaat
atcaaagagctgctcgacgtccacacggagatcaacaaggagttgcgtcgcaagcgcaaa
gaggatccactagtcaggcaaatcggcgacacgctgctggccactttcaccggaccgcag
ggtgagcagcttcaaaaggcggcagcttctttctgtgagcgtcaacaactggcccttgaa
ttaatcaagaagcggcgggagcgagacaataagtttgactcgttgctgtgcgagtgcgag
aagaaacgccagtgtcgtcgtctagagttgcaaagtattgtgccatatgaaatgcagaga
atcaccagataccctcttctgctggagcgattggtggagagtgtcgaagcagcagagaag
acgtgtagtgaatacaaagacgaattagttaagctgagggaagcgcaccttcactccaag
gcaatcttggggttcgtggatgaggcggccaaactagcccacaaccggcatcggctcgag
gaaattcaacgacatttggatgtttctaatttcaagaatagcgatcatcctattgtgaac
gattttaggaatatcgatctaactaggtataagctgatactagagggtggccttcaactt
agacggcctaataaagcgaacgtgcacgtgcacgttctcctgatggaggaaatggtggtg
atatttcaaaaggaaagcgaaaaattcattttgaaattcttccagtcgggctcgtccacc
ccaatggctccattgagccccatcatcaaaatgaacacacttttagcccgtgaaaatgct
gtctgtaaaaatgcccttttcctcgtaaatacctcaaccaccagcagtcagatgtacgat
cttcaagcggaagacgaatcgaagcgggaaacatggctgaagcactttacggatgcagca
gcagcatacaaccgacgagaggataaaatcaccagaacaacgggcagcattagcattaca
cagcccgtaaccgattctgattcggaatcgattcttcgggaggcatccagggaaccggaa
cccgttgttgaatccgcagaccgactttcgtcctctttcacaactgcggagaaagaggac
gcaaaccaacctgcagaaactgccgcaggagaggatgatgctgtgagtgttgaggatcct
caagcaggcggcgatcacactccaggtattaaagagtcggatgtgacgagtggtggtggt
ggtattcacgtaacgacgaaagtgagcgctgaagaatggcctttgatccaaccttcgcaa
gttagcgtagcggtaccaccagtgcatacggcagaatcgaagcttacacccctagagcaa
atccgacgaaaagatgcactagtgaaacaaacgttagccgaaaaggacgatctggtggct
gatttacttgccattccgcgggaggactttcagcacatcgccgacatggcttcgactgct
tcaagcaatgcggacagccactctttggatataaccgatcggctgctggccactgtcttc
caggttgatattcttcaacgagcagtaaacgacgccctcaacataacggaaggtgatgtg
atcgctgctaggggtggcaaagtgcccatttgcgccagccaagagggcgcaaccgaaacc
agatctgtgattcccagtgtgcctgctggattagttggagaaattgccgcttctctaagc
tctcagcttaccactctattgagtgaaatcaagcatgtagaagaggaccgtgatcggctg
cgcaaagaactgcataaaatcagggagcagctgcacgaagagcatcatctacatagtcct
gtgccatttgaagatgcattagaccctgatgaaagtgcccaggagatattttgcgaagca
ataagtgacgatccaaactaa
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integrated database retrieval system
