Dendroctonus ponderosae (mountain pine beetle): 109534409
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Entry
109534409 CDS
T04899
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03018
RNA degradation
dpa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109534409
09123 Folding, sorting and degradation
03018 RNA degradation
109534409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpa03019
]
109534409
03041 Spliceosome [BR:
dpa03041
]
109534409
Messenger RNA biogenesis [BR:
dpa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109534409
mRNA degradation factors
5'-3' decay
Lsm complex
109534409
Spliceosome [BR:
dpa03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
109534409
Complex C
U2 snRNP components
109534409
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
109534409
NCBI-ProteinID:
XP_019755640
UniProt:
N6TPC3
LinkDB
All DBs
Position
Unknown
AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTEISVTDTEKYPHMLSVKNC
FIRGSVVRYVQLPGDEVDTQLLQDAARKEASAPTR
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgcttttctactcatttttcaagtccctggtgggaaaggacgtggtggtggagctgaaa
aacgatctgagcatctgtgggacgctgcactcagtggaccagtacctcaacataaagttg
accgaaattagcgtcaccgacacggagaagtatcctcacatgttgtcagtgaaaaactgc
ttcatcagaggctcagttgtaagatatgtgcagctgcctggggatgaagtggacacacag
ctattgcaagatgcagccaggaaggaggcatctgccccaacgcgatag
DBGET
integrated database retrieval system
