Dendroctonus ponderosae (mountain pine beetle): 109534874
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Entry
109534874 CDS
T04899
Name
(RefSeq) ATP-dependent RNA helicase vasa
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpa03036
]
109534874
Enzymes [BR:
dpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109534874
Chromosome and associated proteins [BR:
dpa03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109534874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
109534874
NCBI-ProteinID:
XP_019756211
UniProt:
A0AAR5P6I0
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MDDDWDDGVVAAPMPPTSFASEGGTKFAAGRGFKPVDMGSDNTWNNDATVGGWGDSEAPS
DFGNGGRGGRGRGGRGRGGRDRDGGGRDRNGGGRDRDGGGRDRNGGGRDHDGGGRDRYGG
RDRDGDRNRDGDRNRDGGDSWNNRRNDDKKDENGEPQKPREIYIPVERVNDDNLFTETIT
SGVNFIKLDDIDVKVTGEDVPNPISSFDKSELRPHLLGNVKKSGYLQPTPIQKHAIPILL
AGRDMMACAQTGSGKTAAFLLPIINMLLQSQKPPETEGETCKPNVVIVSPTRELTIQIYD
QARKFASNSIVKAEVIYGGTSVHHQRSKIMKGCHILVATPGRLNDFVNHGHISFASVQFI
VLDEADRMLDMGFLPIVESMLGHSTMVATGDRQTLMFSATFPEEVQHLAGKFLHNYIFVA
VGVVGSASTDVEQVFYEVSRFDKRNKLMEMLSAAPGEKTVVFVETKRSADFLATFLSENS
IQSTSIHGDRLQREREAALWDFKKGIRSILVATGVAARGLDIEGIQHVINYDLPKSVDEY
VHRIGRTGRVGNRGKATSFYDSKCDSAITGPLATILKQAGQEVPEFLLGGGYGGGYDNGN
FGGRDIRGENFGQGQNFNQVPVENEDEDW
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgattgggatgatggagtggtcgctgcgccaatgccccccaccagttttgcc
tcagaaggaggcactaagttcgcggcaggccgcggctttaaaccagtagatatgggatca
gacaacacatggaacaacgatgcgaccgtcggcggatggggcgattcggaagcccctagc
gactttggcaatggcgggcgaggaggccgaggccgcggagggcgtggccgaggtggcaga
gatcgagatggaggaggcagagaccgaaatggaggtggtagagatcgagatggcggaggt
agagatcgaaatggaggcggccgagaccatgatggaggtggcagggatcgttatgggggt
agagatcgggacggcgacaggaatcgtgacggcgatagaaatcgcgacggcggcgatagc
tggaacaaccgccgcaatgacgataagaaagatgagaatggcgagccgcaaaaaccaaga
gaaatctacattccggtggaaagagtgaacgacgataatctgtttacggagacaatcaca
tctggtgtgaactttataaagctggacgatatcgacgttaaagtcacgggagaagatgtt
ccaaaccctatttcgtcctttgataaatcggagctgcgccctcatctactaggcaacgtt
aagaagtctggttacttgcaaccgactcccattcaaaagcacgccataccgatcttgtta
gctggccgcgatatgatggcctgcgcccaaactggctcaggaaaaaccgcagcttttctg
ttgccgattattaatatgctcctccaaagccaaaagcctccggaaaccgaaggtgagacc
tgcaaacctaacgtggttattgtcagtccaactcgagagctgaccatccagatctacgac
caggcgaggaagtttgcctcaaattccattgtaaaagctgaggttatctatggaggcacg
tctgtgcaccatcaacgaagcaagattatgaaaggctgccatatcttagtggctactcct
ggccggttgaacgactttgttaaccacgggcatattagtttcgcttccgtgcagttcatt
gttctggatgaagctgatcgaatgctggatatgggatttttgccgattgttgaatccatg
ctgggtcattccaccatggtagccacgggcgatagacagacgctgatgttctccgcaacg
tttcccgaggaagtgcagcacttggctggcaaatttctgcacaattacatttttgtggcg
gttggagtggtgggcagcgcatctacggacgttgagcaggtcttttacgaagtctcgcgt
ttcgataagaggaacaagttaatggaaatgctctcggcagctcctggcgaaaagacagtg
gtgttcgtagagacaaagcgaagcgccgatttcttagccacgtttttgagcgagaatagc
atccagtcgacgagtattcacggtgaccggctgcagcgagagcgcgaagctgctctttgg
gacttcaaaaaaggaattcgatcaattctggtcgcaacgggggtagcggccagaggcttg
gatattgagggtatccaacacgttataaactacgacttgcctaagagcgtggacgagtat
gtgcatcgcattggcagaaccggtcgagtgggaaatcgaggcaaagccaccagtttctat
gattcaaaatgcgatagcgccattaccggtcccttggccactattttgaagcaagcgggt
caagaagtgccggagtttttgcttggcggcgggtatggaggcggttacgacaacggaaac
tttgggggccgggacatccgaggggagaacttcggacagggccagaacttcaaccaggtg
ccagtcgaaaacgaggacgaagattggtag
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