Dendroctonus ponderosae (mountain pine beetle): 109534945
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Entry
109534945 CDS
T04899
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpa03021
]
109534945
Transcription machinery [BR:
dpa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
109534945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_1
TPR_14
TPR_8
TPR_12
TPR_CcmH_CycH
TPR_16
TPR_17
TPR_11
TPR_10
TPR_6
TPR_7
ARM_TT21_5th
TPR_MalT
ARM_TT21_4th
TPR_Slam
PknG_TPR
Peptidase_S41_N
RPN7
Motif
Other DBs
NCBI-GeneID:
109534945
NCBI-ProteinID:
XP_048526049
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MAASIEIPLRDTDEVIELYSDQLPEGDEVLGILRQENTQLSIWVNLALEYYKQNQIDDFL
KILEASRSDANVEYRDYEKDQMRALDMLAAYYVQQANREKNKDKKRDLFTKATLLYTTAD
KIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPNNIPSLLGKACIAYNKKDFRG
ALAFYKKALRTNPSCPAAVRLGMGHCFMKLNNQDKARLAFERALELDPKCVGALVGLAIL
KLNKQHPDSIRNGVQMLSKAYTIDSSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTEN
EAMRAESCYQLARAFHVQDDYDQAFQYYYQATQFATVAFVLPHFGLGQMYIYRGDTENAA
QCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKVTEQFPDDIEAWIELAQI
LEQSDLQGSLNAYGTAVNILKKDVQAEIPTEILNNVAALHYRTGNLEEAKKTLEEALERA
KSEAQHDPQYYNIISVTITYNLARLNEALCIFDKSEKLYKDILKEHPNYVDCYLRLGCMA
RDKGHIYEASNWFKEALGINSEHPDAWSLLGNLHLAKAEWGPGQKKYERILKNPATSQDS
YSLIALGNVWLQTLHQPSKDKEKEKKYQSRSLSMFKQVLKIDPKNIWAANGIGAVLAHKG
AVNEARDIFAQVRESTADFCDVWLNIAHIYVEQRQYVSAIQMYENCVRKFFKYNNVEVLQ
YLARANYKAGKLKEAKMVLLKARRVAPQDTVLLYNIALVLQRLATQILKDEKSTLQTVLQ
AVHELGLSLKYFTYLSEFGDKMRYDVNLAGLEARQCKDLLSQAQYHVARARRVDEEERLL
RRKQDEERTAFKMKQLEEMKKREEEKRLTKEQMLQKRQEYKEKTKNALLFQEMPSEKKTK
GGRGRKDVYVSDSESGQENREVGGESRPPKDKKERGRKRRRSGDRKKKGAGGRKKKRHGS
GEINDSDSSGEQPSRGKQARKEKRRPQRKVSDEGLSAKQKSRIVSKATISTSEDESDNEK
RPRPVSDDSDSATVNKKRRISSGSESDKSRSRSRSKSRSRSKSKFSSRSRSRSKSGSRSK
SGSGSRSRSRSRSKSGSRSNSRSQSRSQSRSKSRSRSRSSGKSRSRSRSRSKSQSRSKSR
STSRSKSRSRSKSRSKSKSPSRSRSRSKSGSRSRSKSRSKSKSHSRSPSKSD
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttccatagaaattcctttgcgggatactgacgaggtgatagaactttattcg
gatcagcttccagaaggagatgaagttctgggtattttacgacaagaaaatacgcaattg
tcgatatgggtgaatcttgctttggaatactacaagcaaaatcaaatcgatgactttctc
aaaatcttggaagcatctcgttcagatgccaatgtcgaataccgtgactatgaaaaggac
cagatgcgcgcccttgacatgctggctgcctattatgtgcagcaggctaatagggagaaa
aacaaggataaaaaacgagacctttttaccaaagctaccttactgtacacaaccgcagat
aaaatcattatgtacgaccagaatcatttgctgggtcgagcatacttttgtcttctcgag
ggagacaagatggagcaggcggatgctcagtttaatttcgtactaaatcagtcgcccaat
aatataccatcgttattgggaaaagcgtgcatagcctataataaaaaagattttagaggt
gctttggctttttataaaaaagcacttcgtaccaatcctagttgtcctgctgcagttagg
ctaggcatgggtcattgctttatgaagttaaacaaccaagacaaagccagattggctttt
gaaagggcattagaattagatcccaaatgcgttggagcgctagtaggtttagctatttta
aaactgaataagcaacatccagattctatcagaaacggcgtccaaatgctatctaaagct
tatactattgattcgtcaaatcctatggttttgaatcacttagcgaatcatttctttttt
aagaaagattatagcaaagtacaacatttggctttacatgcctttcacaacaccgaaaat
gaggcaatgcgtgctgaaagctgttatcagcttgctagagccttccacgtacaggatgac
tacgatcaagcctttcagtattattaccaagcaacacagtttgcaactgtggcatttgtg
ctgccacatttcggcttgggtcaaatgtatatctacagaggcgatactgaaaacgctgct
caatgctttgagaaagtcttgaaagctcaaccgggcaactacgaaaccatgaaaattttg
ggatccttatacgcaaattctagttctcagtcaaaaagggatattgcgaaaaatcattta
agaaaagtgactgaacagtttccagacgacatcgaagcatggattgaattggcacaaatt
ttggaacaatcagacttgcaagggtcgttgaatgcatatggcaccgccgttaatattttg
aagaaagatgttcaagctgaaattcccacggagatcttgaataatgttgctgcattgcat
tataggacaggaaatctggaagaagccaagaaaaccttagaagaggccttagagcgtgca
aaatcggaagcacaacacgatccacagtattataatattatatctgttactattacctat
aatttagcccgactaaacgaagcactctgtatatttgacaaatcagaaaagctctacaaa
gacattttgaaagaacatccgaactatgttgactgttacttaagactgggttgcatggcg
agagacaaaggccacatttacgaagcatcaaattggtttaaagaagctctgggcattaat
tcggaacacccggatgcttggtctttactgggaaaccttcacttggctaaagccgaatgg
ggacccggacaaaaaaaatatgaaaggatattaaagaatccggctacgtctcaagattcg
tactcgttgatagctcttggtaacgtatggttacaaactttgcatcaacccagcaaggac
aaagaaaaagaaaaaaaataccaaagtagatcattaagcatgtttaagcaagtgctgaaa
atagacccgaagaatatatgggctgctaatggaattggggcggtgttagctcacaagggt
gccgttaatgaagcaagagacatattcgcacaagttagagaatcaacagcggacttttgc
gatgtttggttgaatatcgcacacatttatgtagagcaaagacagtatgttagtgctatt
caaatgtatgaaaactgtgtaagaaagtttttcaaatacaacaacgttgaagttcttcaa
tatttggctagggccaactataaagcaggcaaactaaaagaagcaaaaatggtgctatta
aaagccagaagggttgcacctcaagatacagtactgctttacaatatcgctttggttctg
cagaggttggctactcaaattttgaaagatgaaaagtcgactttacaaacggtattgcaa
gctgttcatgagctaggactttcgttaaagtattttacgtatttgtcagaatttggggat
aaaatgcgatacgacgtaaatttagcgggactagaagctcgacaatgtaaggatttgcta
tctcaagcgcagtatcacgtggccagagccagaagggtggatgaggaggaacgattactt
aggagaaagcaagatgaagaacgcactgcattcaaaatgaaacagctggaggaaatgaaa
aaacgagaggaagaaaaacggctcaccaaagaacagatgctacaaaaacgtcaagaatac
aaagagaaaacaaagaacgctctactgttccaggaaatgccatccgaaaagaaaacaaag
ggtggaagaggcagaaaagacgtttacgtttcagattcagaaagtgggcaagaaaatcga
gaggtgggtggcgaatcgagaccaccgaaagacaagaaagagcgaggacgaaaacgcaga
agaagtggggacagaaagaaaaaaggtgcaggtggtaggaaaaagaaaaggcatggcagc
ggagagatcaatgactctgatagcagcggagaacaaccttcaaggggaaagcaagcacga
aaagaaaagaggagaccacaaaggaaagtctcagatgaaggacttagcgctaaacagaag
agcagaattgtttcaaaagccacaatttccactagtgaggatgaaagtgataatgaaaag
agacctcgaccggtcagtgacgatagtgactcggcaacagtgaataaaaaacgtcgcatt
tcctccggttcggagtcagataaatcgagaagcaggtcaagatcaaaaagtagatctcga
tctaagagtaagttcagctcacgaagtagatcaagatcgaaaagtggatctagatcaaaa
agtggatcaggatctaggagccgatccagatcaaggtccaaaagcggatcaagatcaaac
agcaggtcacaatctagaagccaatctagatctaaatcaaggtctagaagcagatccagt
ggtaaatcaagatcgaggtcgagatcgcgatcgaaatcccaatctagatctaaatccaga
agtacttcgaggtcaaagagcagatcacgtagcaaatctaggtcaaaatcaaaatcgccc
tcacgctctagatccagatcaaaatctgggtcccgatctaggtccaaatcaagatccaaa
tccaagtcgcattccagatcgccttctaagagtgattaa
DBGET
integrated database retrieval system
