Dendroctonus ponderosae (mountain pine beetle): 109535428
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Entry
109535428 CDS
T04899
Name
(RefSeq) RNA exonuclease 5 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109535428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpa03009
]
109535428
Ribosome biogenesis [BR:
dpa03009
]
Eukaryotic type
Pre-60S particles
RNases
109535428
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
109535428
NCBI-ProteinID:
XP_048520456
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MTGPLETSPKKRHRIENKKKKMAALLDIVKLNETDRLKVKNSKSVEVHPQRTEQINGDGP
DCNGQSPNKKLKTDVTVAFGPSGRPLLEGDELLQLKKMLQEKTKKIRQMPKFRLRDMGEN
ASLQIPLESRCPLFLSDIQHLLMYSQIGVHSPYCPTRWCHLEKYNHLTNVTLLIVENMSV
YNYEAFESYFPFTSANFEHKLEMISPYAFNSNIIKELSMVPLSMTQMRKLITEYGTLEEA
AKHCSEVFDTVNNLFPIDGDFDDEDTPVLSKKDKYSRTQLLLSGWQMIEENFPLPIKGLV
ERKYSDYTLTKDRYRNVSARSPLIAIDCEMCRTDTGDLELTRISAVNEQHEVIYDTLVKP
KNKIVDYLTRFSGINAKMMKTVRTDLQEVQNKLRKLLPEDAILIGQSLSNDLHALKMMHP
YVIDTSVIYNLTGDRARKTKLQILASQFLDEKIQAGNHGHCSSEDSLACMKLVQLKLRKN
RYYGDAVMNSIYVKKRSYPDMGDANYAISMFKQCVKNGNTVNIVAVADLVDQYKVCIDKD
NKNIPEIKCVKVESNKNVIKHLCKTMNNSNLNLGHIRIASEHASSEKTFKTVDKWIKELH
KSAEHPALLAVMLSGCQEGGNGTCFLHLKKQFIS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgacaggcccattagaaaccagcccaaaaaaacgccatagaattgagaataaaaagaaa
aaaatggctgcattattagatatagttaaactgaatgaaactgacaggcttaaagtgaag
aatagcaagtctgtggaggttcatcctcaaagaactgagcaaatcaatggagatggcccc
gattgcaatggtcagagccctaacaagaaattaaaaacagacgtaaccgtcgcatttggc
ccttcggggaggcctttactggaaggtgatgaattattacagcttaaaaagatgctgcag
gagaaaacaaagaagatccgacaaatgccaaaatttcggttgcgagatatgggagaaaat
gccagtttgcaaataccactagagagtagatgccccctttttttgtcagacattcagcat
cttctaatgtattcacaaatcggtgttcattccccatattgtccgacaagatggtgccac
ttagaaaagtacaatcatctaaccaacgtgactctgctaatcgttgaaaacatgtctgtc
tataattacgaggcattcgagagctactttcccttcaccagcgcaaacttcgaacacaaa
ctagagatgatttcgccttatgccttcaacagtaatattattaaagagttgtccatggtg
ccgttatctatgactcaaatgcgcaaattgattaccgaatatggaacgcttgaagaggct
gcgaagcactgcagcgaagtattcgataccgtaaataatttatttccaatcgatggtgat
tttgatgacgaagatacgcccgttctgtctaaaaaggataaatattcacgaacccaatta
ctactctccggatggcaaatgattgaagaaaacttcccgctgccaatcaaagggctagtg
gaacgcaaatactctgattacacgctaacgaaagatcgatatagaaatgtatcagctcgt
agtcctctgattgctatcgattgtgaaatgtgcagaacagacacaggcgacctagaatta
acaagaatttcagctgtgaatgagcagcatgaggttatttacgacacattagttaagccc
aaaaacaagatcgtcgattatttaacgcgcttttccggaattaatgcgaaaatgatgaaa
accgtccgcaccgaccttcaagaagtccagaataagttacggaaactgctgcccgaagat
gcgattttaattggccagtctttgtccaatgatttgcatgcattgaagatgatgcatcca
tatgtaatagacactagtgttatatacaatttgactggagatcgggcacgcaaaaccaaa
ctacagatccttgccagtcaatttttggatgagaaaatccaagctggaaatcatggacat
tgtagttcggaagacagtctggcctgcatgaaactagtgcagctgaagctgcgaaaaaac
cgttattatggggacgctgtgatgaattcgatctacgtgaagaaacgatcctatccagac
atgggagatgctaactatgccatcagcatgttcaaacaatgtgtaaaaaacggcaatacc
gtcaatatagtcgctgtggctgatttggttgaccagtacaaagtctgtatcgataaagac
aataaaaacatcccggaaatcaaatgcgtgaaagtggaatccaataagaacgtgattaag
catttatgcaagacaatgaacaacagtaacttgaatctgggacacattcgaatagccagt
gagcatgcgagcagtgagaaaacattcaaaacagtggacaaatggattaaggagctgcac
aagtcagcggagcacccggcacttctggctgttatgttaagcgggtgtcaagagggtggc
aatgggacttgtttccttcatttgaaaaaacaatttatttcgtaa
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