Dendroctonus ponderosae (mountain pine beetle): 109535780
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Entry
109535780 CDS
T04899
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13 isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpa04121
]
109535780
Enzymes [BR:
dpa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109535780
Ubiquitin system [BR:
dpa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109535780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
PA
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_16
Prok-RING_4
zf-ANAPC11
zf_RING_Vps8
Hemotin
Cadherin_C_2
zf_RING_Vps8_fungal
PHD
T4SS_pilin
zf-RING-like
zf-C3H2C3
zf-RING_4
zf-Nse
MWFE
zf-RING_Vps41
LapA_dom
Collectrin
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
109535780
NCBI-ProteinID:
XP_019757336
UniProt:
A0AAR5P9K2
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MFFLVVALLSIQQIYVSEAEIYAFKNNSEFFYEEFVDAPSSFGADLSDGPVRGAIVNAIP
SHACNESLKPAPSGKRSWRADILLVPRYTSEANCTFERKVRMAQLKGYNAIIVYNVGSNE
LVPMSAKNSTGITIPSVFVSQSSGVMLTGYANWDYIVVITADTPFNIQTHLLIPFAIVVG
ICMVVMIVFMIVKYIKDRRRQRRYRLPKSQLNKIPTCKFQKGDRYETCAICLEDYIEGEK
LRVLPCNHVYHMKCIDPWLTKNKRVCPICKRKVFAHDEPHQESDSDSDSEDTTPLIRSGP
RVTQGGTFEIQNENPFSRAARSISQVLEGRSVVTASDHHSINTERHDWQSVASSDSSDTV
STSDYSSCSNVFPIVDCLIHNSDRHDEDNAEHHHGNPFEHDDNETKPEVDVIENQSNCSV
EDLPHSNYECDDNIV
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcctagtagtagcgttactgagcattcagcagatctatgtcagtgaagctgag
atatatgcctttaaaaacaattcagagttcttctacgaagaatttgttgatgctccttca
tcgttcggggcagatctctcggatggtcctgttcgcggggcgatcgtgaatgcgatccct
tcgcatgcttgtaacgaaagcttaaaaccagcaccgtctggcaaacgcagctggagagcg
gacatactgttggtaccaagatatacatcagaagcaaattgtactttcgaacgaaaagtg
cgaatggcccaactgaaaggctacaatgcgattatcgtctataatgtgggttccaatgaa
ttggtacccatgtcagctaagaactcaactggaattacaataccatcagtgtttgtcagt
cagtcgtcgggagtcatgttgaccggttatgctaattgggactatattgtggtcatcact
gctgacaccccgtttaacatccagacgcatcttttgattccgtttgcaattgttgtaggc
atatgtatggtggttatgatagtgtttatgattgtcaaatatataaaagatcggagacga
cagaggcgataccggctacccaaatcccagctgaacaaaataccgacttgtaaatttcaa
aaaggcgacagatacgaaacatgtgcgatatgtttagaggactatattgaaggggagaaa
ctgagagttttgccctgtaatcatgtatatcatatgaagtgcatcgatccctggctgacg
aaaaataagcgagtgtgtccgatttgcaagcgaaaagtatttgcccatgatgaaccgcat
caggagtcggacagcgacagtgattcagaggatacgacccctttaatcagatctggccct
agggtgactcagggtggaactttcgagattcagaatgagaatcctttcagtagggccgcg
agatcaatttcacaggttttggagggtcgcagtgttgttacggcgtcggatcatcatagc
attaatacggaaaggcacgactggcaaagtgttgctagctctgattctagtgacacagtg
agtactagcgactacagtagttgtagtaatgtgttccctatcgtagattgtttgattcac
aattcggatcggcatgatgaagataacgctgaacatcatcatggaaatcctttcgaacat
gacgataacgaaactaaacctgaagtagacgtgattgaaaaccagtctaattgctccgtt
gaagacttgccacactcaaattacgagtgcgacgataatattgtgtaa
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