Dendroctonus ponderosae (mountain pine beetle): 109535945
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Entry
109535945 CDS
T04899
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109535945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpa03019
]
109535945
03009 Ribosome biogenesis [BR:
dpa03009
]
109535945
03036 Chromosome and associated proteins [BR:
dpa03036
]
109535945
Enzymes [BR:
dpa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
109535945
Messenger RNA biogenesis [BR:
dpa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
109535945
Ribosome biogenesis [BR:
dpa03009
]
Eukaryotic type
90S particles
RNase
109535945
Prokaryotic type
rRNA processing factors
109535945
Chromosome and associated proteins [BR:
dpa03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
109535945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-GeneID:
109535945
NCBI-ProteinID:
XP_048526473
LinkDB
All DBs
Position
Unknown
AA seq
1341 aa
AA seq
DB search
MSNPEWYYNQPRYNNTIPSASPQQNGFCPVPPEAAPSVQWGYNWTQENVAGRYVQSTYAC
APLNVADTQYPYSPNQYTIPPPFPIENVTQRGYMQDCHSNKTAEGFGPSNRFSSKYRTSR
SGSVVSQSVTTTTSEESRHRTDSSNRAFRSRSYASSRSSISRRRSRSRSRATTSRSNRRD
RYSKETNRYRSPQRSRDYCARREDNRTTNRKSRDKEITHFKSNPSHASQTERDAILKLWK
NNYCNTQQKITEKLEEYVKKNEDIISAERKIWTRSTPSELYYEREETNFKILKGSEKLVE
MCKSFKNELLDRSANINMLKPKYEPPPRRNRRRMCKHKTEVRSSSSDSDSSNGSFSDEED
YSMEELQRKQQHPDRLDTEMWYNDPGEMNDGPLCRCSYKSRKSGIRHGIYPGELPIPKCS
IFTNNADKLFHYRIIISPPTNFLIKAPTIIQHDEHEYIFEGFSILSHFPLPNLPPCKVIR
FNIEYTILYYEEKFPEHFTISEIDLFSMFLFKEVLELVDLDLVTPLDSQSCSRFHFMPRF
VRELPGDGKEILCMQQVIKYLLDSSVPLIQECDLESMVKMSQYEWQNFADELKGMVVTCP
GKKPSSVRVDQLDRNIDLQKEGDYKFPEIVHFGIRPPQLSYAGNPDYQKAWREYVKFRHL
IANMSKPTFDDKRKLEAKENKLQEMRTQGQMKRDVTVAVSAEGFYRTGIMCDIVQHAMLM
PVLVCHLRFHNSLNILEESLNYKFQNRGLLQLALTHPSYRENFGTNPDHARNSLTNCGIR
QPEYGDRRIHYMNTRKRGINTLINIMSRFGKQEETESNITHNERLEFLGDAVVEFLSSIH
LFFSFPELEEGGLATYRAAIVQNQHLALLARVLKLDQFMLYAHGSDLCHDLELKHAMANC
FEALMGALFLDGGIDVADQVFSNTLFRDNPDLLKVWVKLPPHPLQEQEPTGDRHWIQKFE
ILNKLTEFEMSINVEFNHIRLLARAFTDRSVGYTNLTMGSNQRLEFLGDTVLQLIASEYL
YRYFPEHHEGHLSLLRSSLVNNRTQAVVCDDLGMAQYALYSNPKPELKTKDRADLLEAFI
GALYVDQGMEFCELFCQVTLFPRLQDFIMNQDWNDPKSKLQQCCLTLRTMDGGEPDIPVY
KVIECKGPTNTRVYTVAVYFRGRRLASAMGHSIQQAEMNAAKKALELSQDLFPQLDHQKR
VIVKSLKRQRKHKNSKNPHQQRDTKSPESYSRHRFKSKSPDPENGRHRTLHTKSRKDSKS
LSKTATQYSTRKKSSSSSESEAESSTTKKTNTQSPQYTSENSSDSSSEYTALHRTNFKKL
IGRSDSISDLLECSGTDKGPV
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatcctgagtggtattacaatcagccacggtataataataccataccttcagct
tctccgcaacagaatggtttttgtccagttccccccgaagcagcaccttccgttcaatgg
ggctacaactggacgcaagaaaatgttgccggtcggtatgtccaatcaacatacgcatgt
gcgcctcttaatgtggcggatacacaatatccatattcgcctaatcagtatacgattccg
ccaccgtttcccattgaaaatgtcacccaacgtggatacatgcaagattgccattctaat
aaaactgcagaaggttttggtccctcaaaccgttttagttccaaatatagaacaagtaga
tctggttcagtagtatcgcaatcggttactactacaacttcagaggaatcgagacatcgc
acagatagttcaaatagggcatttagaagcagaagttatgcaagtagtcgtagcagtatt
tctcggaggaggagtagaagtagaagtagagcaacaacttcacgtagcaatagacgagat
aggtattcaaaggagactaatagataccgaagtccgcaaagaagcagagattactgtgca
agacgggaggacaatagaacaacaaatagaaaatcgcgagacaaggaaattactcatttc
aaatcgaatccatcgcatgcatctcaaaccgaaagagatgcaattttaaaattatggaag
aacaattactgcaatacccaacagaagattacagaaaaattggaagaatatgttaagaaa
aacgaagatattatttccgctgaaagaaaaatttggaccaggtccacaccatctgaattg
tattacgagagagaggagactaattttaaaatactgaaaggctctgaaaaattagttgaa
atgtgtaaatcatttaaaaatgagctattggatagatctgcaaacattaatatgcttaag
ccaaagtatgagccgcctccaaggagaaatcgtcgtcgaatgtgcaaacataaaacggaa
gtcagaagcagtagttcagattcggacagttctaatggtagcttttctgatgaagaagat
tattctatggaagagcttcagagaaagcaacaacatccagaccgccttgacacagaaatg
tggtataatgatccaggagaaatgaatgacggacctttgtgcaggtgttcctataagtca
aggaaatctggcatcagacatggaatttaccctggcgaattgcctattccaaaatgctct
attttcaccaacaatgctgataaattgttccattatagaattattatatctcccccaaca
aactttttgatcaaagcacctactattatccagcacgacgagcacgaatacatttttgaa
ggattttcgattctatcccattttccattacccaacctgccaccttgtaaagtaattcgt
tttaacatcgaatacaccattctgtattacgaagaaaaattccctgaacattttaccata
tcagagatcgatttattctctatgttcctatttaaggaagtcttagaactggtagatcta
gatttggtcactcctcttgacagtcaaagttgttctcgatttcactttatgccgagattt
gtaagagagttgccaggagatggaaaagaaattttgtgcatgcaacaagtcataaaatac
ctgctggatagttctgtgccgcttattcaggaatgcgacctggaaagtatggtgaaaatg
tcccaatatgagtggcaaaattttgctgacgaattgaagggcatggtggtgacatgtcct
ggaaaaaaaccatcttccgtacgtgtcgatcaattggatcgaaatattgacttgcaaaaa
gagggagactataagtttccggaaattgttcattttggtattcgacctccacaattaagc
tacgctggcaatccggattatcagaaggcttggagagaatatgtaaagttcagacatctt
attgcaaatatgtcaaagcctacctttgacgacaagaggaagctggaagccaaagaaaac
aagctgcaagaaatgagaacacaaggacaaatgaaacgtgacgttactgtagcagtttct
gcggaagggttttatcggacaggaataatgtgcgatattgttcaacatgcaatgcttatg
cctgtattagtttgtcacttaagattccacaattcactaaatatactagaagaatctctc
aattataaatttcaaaatcgcggattgcttcaactggctctaacccatccatcatataga
gaaaattttggtacaaatccggaccacgcccgaaatagtttaacgaattgcggtattaga
cagcctgaatatggagatcgaaggatccattacatgaacactagaaaaagagggattaat
acgctaataaacattatgtcgcgatttggaaagcaagaagagaccgaatcaaatataact
cataacgagcgtttggaatttttgggcgatgcagttgtagaatttttatcgtcgattcat
ctatttttttcatttcctgaacttgaagaaggcggtcttgccacgtacagggctgcaata
gttcagaaccaacatcttgctcttctggccagagtattgaaacttgaccaatttatgctt
tatgcacatggttcggacttgtgccacgatctagaattaaaacacgcaatggctaactgc
ttcgaggccctgatgggcgcccttttcttagacggaggaattgatgttgccgatcaggtc
ttttccaatactttgttcagagataatccagacttattaaaggtttgggtaaaacttccc
ccacatccattgcaagagcaagaaccgactggtgatcgacactggattcagaagtttgaa
atcttgaataaactcaccgagtttgaaatgagcattaatgtcgaattcaaccacataaga
ctgttagctagagctttcaccgataggagcgttggatacaccaacttaactatgggatcg
aatcaaagattagagtttttgggtgataccgtattacaactcattgcctccgaatatcta
tataggtacttcccagagcatcatgaaggacatttatctttacttagaagctcgttggtg
aataataggacgcaagctgtagtttgcgatgatctagggatggctcaatatgctttatac
agcaatcctaagcctgaacttaaaaccaaagatagagccgatttactagaagcttttatt
ggagctctttacgtggatcaaggtatggaattttgcgaactattctgtcaagttacgcta
tttccacgacttcaagattttattatgaatcaagattggaatgatccaaagtcaaaacta
caacagtgctgcctaaccttacgtactatggatggaggggagcctgatataccagtttac
aaagtgattgaatgtaaaggtcctacaaacaccagagtctatacggtagcagtctacttc
agaggaagacgtttagcgagcgcaatggggcacagtattcaacaggctgaaatgaatgcc
gccaaaaaagccctagaattgtcacaagatctattcccacagcttgatcatcagaagcgt
gtaattgtgaaaagtttgaagcgccaacgaaaacacaaaaattcgaagaatccacaccag
caaagagacaccaagtcaccggaaagttattcaaggcatcggtttaagtcaaaaagccct
gatccggagaatggtcgtcaccgtactttacatacaaaaagcagaaaagactctaaatca
ttaagtaagacagctacccagtactctactcgaaagaagtcatcttcaagtagtgaaagt
gaagcagaatcttccacaaccaaaaaaacaaatactcagtcaccgcaatatacaagcgaa
aattctagcgacagttcttcggagtatacagcattacatagaacgaatttcaagaaattg
ataggcagaagtgactctataagtgacttgcttgaatgctcgggcactgataagggccct
gtgtga
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integrated database retrieval system
