Dendroctonus ponderosae (mountain pine beetle): 109536300
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Entry
109536300 CDS
T04899
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa04137
Mitophagy - animal
dpa04140
Autophagy - animal
dpa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109536300
04137 Mitophagy - animal
109536300
04148 Efferocytosis
109536300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpa03000
]
109536300
Transcription factors [BR:
dpa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
109536300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
PAS_9
PAS_4
HIF-1a_CTAD
HLH
Motif
Other DBs
NCBI-GeneID:
109536300
NCBI-ProteinID:
XP_048523746
LinkDB
All DBs
Position
Unknown
AA seq
964 aa
AA seq
DB search
MCADIEDNYPSEEFILLGQLLDNQANAAESTLHPCNGVSSCKSLPPSQCRFGQIPNKTPD
CSNKKPTDKIHPNGILAKIGLPCQTQPDYDYDQCYSFYANGCYNTCQFVEVGDIEDFMNN
EKRKEKSRDAARSRRSRETEIFTDLGNALPISSEQISQLDKASVMRLAISYLRVRDMIQL
IPLLPVKDTIHKSLKDESAFLKSLEGFVLVVSSEGDFVYLSENVSDYLGITQIDLLGQNI
YEYSHPCDHDEIRDILAVKTQEESDSPKSVFIRLKCTLTSKGRSVNLKSATFKVIHCTGH
MIKERQPEEEEKGKVSCCLVAVGQPIPHPSNIDTPLPRQTFLTKHSMDMKFTHADDEFMV
ETLGYTPEDLIGTSVYEYHHAMDSDSIGSAFKCLFSKGQCETNRYRFLAKTGGYVWVVTQ
ATLILDKMQKAQSVVCVNFVISGVECKDEVYSAHQLACVKYETSPTLESASQIGCSVLRP
KVIVEPIDNNNGGSSKKSAIEADCPPSPLKTVPPRSRPIAVTAKLFSSFEPPKEPPAESA
GRPHTATKTIFAPRTEDMSKGFLTFSEEEPGLTMLKDEPDDLTHLAPVAGDVCVPLDENP
FITDILDDFLLKENSFGPLLTDEPSDPFISFRDYRDSSPQLLSPNLSKNSDSLPSLCSPN
SSLLDEDQMSTFMNLQMDDDPDLVMKAPYIPMNFSDDLPLLMSTDLMWNNNDKNKSNSRV
DSGSTLAQMLGSSANKRPQKGTDRGGGTVEETNADVINEKTSNCSWSTKLSPKMEVDSVG
QMDRSPNLKRSNNSNYEHQTKKIKNEPKEKMSSELLHQLISNNHQRGRPKSKGNWLLDTG
GKAACISQPSDSVLMNLLEADKPPKAAAEVLPIQTRVSARRGLINANLLGRKKMLHQKQQ
EKYRKQVQSKGSLMRKNSLAMVDPESVPSLLDLTQQDFELNAPVDSSLLQGEELLIALEV
AQSI
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgccgatattgaggataattatccatccgaagagttcatccttttggggcaactt
ctcgataatcaagccaatgccgccgaatcgacattgcacccatgcaatggggtttctagt
tgtaaaagtcttcccccctctcagtgccgcttcgggcaaattcctaacaaaactcctgat
tgctcaaataagaaacctactgataaaatccatccaaatgggattctggcgaaaatagga
ctcccttgtcaaacacagcccgattatgattacgatcagtgttatagtttttacgcaaat
ggatgttataacacttgtcagtttgtcgaagtgggagatattgaggattttatgaataac
gaaaaacggaaagaaaagtctcgagatgccgcccgatcaagacgatccagggaaacggaa
attttcacggatcttggaaatgcccttccaatttcttccgagcaaatttcccagctcgat
aaagcttcggtaatgcgattggccatctcctacttgagagtgcgagatatgatccagcta
attcctctattgcccgttaaagacacaatacacaaaagcctgaaagatgaatcggctttc
ctaaaatcgctggaaggattcgttctagtcgtatcatccgaaggcgactttgtttacttg
tctgagaacgtgagcgactatttaggaattacacagatcgatcttctgggtcaaaatatc
tacgagtacagccatccatgtgaccacgatgaaatccgagacatcctggcggtgaagact
caagaggaaagcgactccccaaaatcggttttcataagattgaagtgcacgttaaccagc
aaggggcgatcagttaacttgaaatcggccactttcaaagtgattcactgcactggtcat
atgatcaaagagaggcaacccgaggaagaagagaaaggcaaagtctcttgctgtttggtt
gcggttgggcagccgattcctcatccttccaacatcgatacacctcttcctcggcagacc
tttttaacgaaacacagcatggacatgaaattcacacatgccgacgatgagttcatggtt
gagacgttgggttacacaccagaagacctaattggaacgtcggtgtacgaataccaccat
gcaatggacagtgattcgattgggtcggcgttcaaatgcttgttttccaaaggacaatgt
gagacaaaccgctacagatttctggcaaaaaccggcggttacgtatgggtggtgactcag
gccactttaattttggacaaaatgcagaaagctcaaagtgttgtgtgtgttaatttcgtc
ataagtggtgtggaatgcaaagatgaagtttactcggcccatcagttggcctgtgtgaag
tacgaaacgtcgcccacccttgaatcggccagccagattgggtgctcagtgttgagacca
aaagtgatcgtcgaaccaatagataataataacggtggcagtagcaagaaatcggcgata
gaagcggattgtcctccatcgccacttaaaaccgtaccaccaagatcacggccgatcgca
gttactgccaagttgttttcctcattcgaaccaccgaaggaaccacccgcagaaagtgct
ggccggcctcatacggcgacgaagacgattttcgctccaaggaccgaggatatgagtaag
ggattcttaacgttttcggaggaggaacctggcttaacaatgctgaaagacgagcccgat
gatttaacccacttggccccagtggccggtgatgtgtgtgttccgctggatgaaaacccc
tttataacagacattctggatgatttcctgttgaaagagaacagctttggcccattgctg
accgatgagccatcagatccgttcatttcgtttcgcgactaccgcgattcttcaccccag
ctgttgtcgccgaatttatcgaagaactctgacagcttaccatcgttgtgcagtccaaac
agttccctactggatgaggatcaaatgtccactttcatgaacctgcaaatggacgacgat
ccggacttggtcatgaaggcgccatatattccgatgaatttctccgacgatttgccattg
ttaatgtccaccgacctgatgtggaacaataacgacaaaaataagagtaacagtcgggta
gatagtggttcgacgttggcgcagatgttgggctcatctgcgaacaaacgtccccagaaa
ggtactgataggggtggaggaacggtggaggaaactaatgccgatgtgattaatgagaaa
acttcaaattgtagttggagtacaaagctgagtcccaaaatggaggtggacagtgtcggg
caaatggaccgttcgcccaatttaaagcgatcaaataattcaaattacgaacaccaaacg
aagaaaataaaaaacgagcctaaggagaagatgtcgtccgagctgttgcatcagctgata
tcgaataatcatcaaagaggcaggccgaaaagtaaaggaaactggctgttggatacgggc
ggaaaggccgcctgtatatcacagcccagtgatagtgtcttaatgaaccttttggaagct
gataagcctccaaaagcggctgcagaagtgctgcccatccaaactcgtgtgagcgctagg
cgcggcttgatcaatgcgaatttgctgggcaggaaaaagatgttgcatcaaaagcagcag
gaaaagtatcgaaagcaggtgcagtctaaaggcagtctgatgcggaagaattcgcttgcc
atggtggatcccgagtccgtaccatctctgctcgatctaacccagcaggactttgagctg
aatgctcctgtggattcttcgctgctgcaaggcgaagagctgctgatcgctctggaagtt
gcgcagagcatttag
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