Dendroctonus ponderosae (mountain pine beetle): 109536400
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Entry
109536400 CDS
T04899
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03030
DNA replication
dpa03410
Base excision repair
dpa03420
Nucleotide excision repair
dpa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109536400
03410 Base excision repair
109536400
03420 Nucleotide excision repair
109536400
03430 Mismatch repair
109536400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpa03032
]
109536400
03036 Chromosome and associated proteins [BR:
dpa03036
]
109536400
03400 DNA repair and recombination proteins [BR:
dpa03400
]
109536400
DNA replication proteins [BR:
dpa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109536400
DNA Replication Termination Factors
ELG1-RFC complex
109536400
Chromosome and associated proteins [BR:
dpa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
109536400
DNA repair and recombination proteins [BR:
dpa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109536400
Check point factors
HRAD17(Rad24)-RFC complex
109536400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA
AAA_lid_RFC1
AAA_11
Rep_fac_C
Sigma54_activ_2
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
109536400
NCBI-ProteinID:
XP_019758150
UniProt:
A0AAR5PAP9
LinkDB
All DBs
Position
Unknown
AA seq
360 aa
AA seq
DB search
MSMLWVDKYRPKELSALDYHIQQAEELKNLVEHSDFPHLLVYGPSGAGKKTRIMCILKEL
FGPGVERLKMEPITVTTPSNKKVEIMTVNSNYHIEINPSDVGIYDRVVVMDLIKNIAQTQ
QIGMTGNQRDFKVVLLTEVDNLTKDAQHALRRTMEKYSANCRLILCATSLSPVIPAIQSR
CLPIRVAAPSVSEIATILQSTCEKEDLELRPELAEQIATAVNGNLRRALLICEVYKMEHG
DLSEQVGEPLPIPEPDWKVFVVQTASLITSEQSIENLMAVRERLYELLSNGIPPEIVLKE
LLTALLMKCDKHIIPQVLREAALYEYRMTQGNKHIVHLEAFVTKFMCLYQRHLKSLMQGF
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgttatgggtggacaaataccgacccaaagagctgtccgctctggactatcac
atccaacaagctgaagagctgaagaatctagttgagcacagtgactttccacatctcttg
gtatatggccccagtggggccgggaagaagacccgcattatgtgcatcctgaaggagctg
ttcgggcctggagtggagcgtttgaagatggaaccgattacagtgacaactccctcaaac
aagaaagttgaaattatgactgtgaacagcaattatcacattgagatcaatccgtccgat
gtggggatctacgatcgggtggtggtgatggatttgattaaaaacatcgcgcaaacccag
cagattgggatgaccggaaaccagcgggactttaaggtggtgctgctaactgaagtggat
aatctgaccaaagacgctcagcatgccctgagacggacgatggaaaagtattcggccaat
tgcaggcttattctatgtgccacgtccttatctccggttattcccgctattcaatcgcga
tgtcttcccataagagtggcggctccaagtgtgtctgaaatagccactattttacagagc
acctgcgaaaaagaagacttggaactgcggcctgagttagctgagcaaatagcgaccgca
gtgaatggcaacttgaggagagcgttgctcatttgcgaggtatacaagatggagcatggg
gacctctctgagcaagtcggcgagcctctccctatccctgaaccagactggaaggtcttt
gttgtacaaaccgccagcttgatcaccagtgagcagagcatagaaaatctgatggcggtt
cgtgagcgtttgtatgaacttctatccaatggcattcctccagaaattgttctcaaagaa
ctgttgactgccctcctgatgaagtgcgataaacacatcatcccgcaggttttaagagaa
gctgccttgtatgagtacaggatgacccaaggaaacaaacacatagtgcatctcgaagcc
ttcgtcaccaagtttatgtgcctttatcagcgacacctcaaaagcctaatgcaaggattt
taa
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