Dendroctonus ponderosae (mountain pine beetle): 109536525
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Entry
109536525 CDS
T04899
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109536525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpa03021
]
109536525
03036 Chromosome and associated proteins [BR:
dpa03036
]
109536525
Transcription machinery [BR:
dpa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109536525
Chromosome and associated proteins [BR:
dpa03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
109536525
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_WDHD1
HMG_box_2
Zap1_zf1
DUF3348
Vir_act_alpha_C
Motif
Other DBs
NCBI-GeneID:
109536525
NCBI-ProteinID:
XP_048524569
LinkDB
All DBs
Position
Unknown
AA seq
1726 aa
AA seq
DB search
MSKRRRTSSIAGRHDDDDSEASTSSGPTMRKRRKIFDPIEACHQLYETIRGHKKNDGSLL
CDSFIRVPKRRQEPGYYDVVSNPIDLLKVQQKLKTDEYNDIHDLEGDIELIVNNTKAFYK
KSTQEWKDADELWNLFLTTKIKLLNPDDDSKAESKSEIKNPNHTPKPVRMPVRRGNSSVK
NNSNHNNSLNNSNSLTSVNSKDDPQQYEELFNVVMTATDDNKKLLNTHFQLLPSKSKYPE
YYEVIEQPIDLKRIAIKIQNNQYPNLLTLEKDLVVMCKNACLFNEPNSQIYNHAKQLKKI
INQKRIEIMEQWSKPSSPSNTSKSGERLKPRKSRNYIAALAQKNQEESDPDSEVDSEPEP
VQSSRRDVESPKLVELHHDDFVCMEPDNPQWKLLETVWRLEGSNGQPLSEPFWKLPSRRI
YPDYYKEIKNPLSLTQIRAKLTKKGYGTVSEVAGDMTIMFENAKKYNIPNSKLYKDAVRL
QRVMQAKVQELLDIDQVTHKKTNKAIRKHMDEDSSARKKSGQKPKNLSPMGTPMRGRPPK
DFVPMKKRLFTLAKYMLDFTCEDGRQPMLGFMEKPSKKLYPEYYEVIDEPIDFLEIESKI
KAEQYSCEKDLVKDFQLMFANCRQFNEENSPIYEDANLMEKHLMIKVEPMFNTVEKQQEV
KNERASARVYKPRKILTPLEKAVKHMFEAVRDYRDPKGERLLCQIFMKLPSRIEYPDYYE
VIKHPIDMERIAHKMKNNFYESVEDLAADLSLMLDNACKFNEPDSQIYKDALVLQRVVSQ
KRLQLKELADDEAPDVAEAVQDILLTLFTTVYNHQDDEGRCYSDSMAELPEHDEVDGKKV
RALSLDLIKRRLDKNLYKRLDTFQVDFFACLDRARRLSRSDSQVFEDSIEMQMFFIHVRD
ELCKHGEVLQSPALIYTSLDARHAIEKLRHQKSMQESIEEDSETRSSDDSVLKDGSNSNG
STEDTMTCNQKTFQVGEYVYLDSKKEGCEPHIIKIEKLYEKNGQQMLYGNHYLRPDETYH
VQTRRFLEKEVFKSDKYVNVALEEIKDRCCVLSVKQYFAMVPEGYDEADVYVLESRYSSR
HRAIKKIKIFSELASSYKLVEREVPLEPKRVMSVFKERLEKHKDELAELQELERMIDDDR
PNVVAYVATDLDDGNTYYEQYNTICSGVIKTGDFVYVVVDGGKQVVAQIDSIWDTSDGKC
YFRGPWFICPSEVPNLTNKLYYKNELLQSTEEDINPIVSIIGKCAVLDYNDYVSLRPSEI
PEQDVFICTSLYDEVNRQIRKLPPEGLKKYYHLTEVVDDEIYYFTKLLNPSKVNVRDALN
SKLRQKLLDSRTAEASPTLTKLADIDIVMEDSLDGGPPSVGSGEIPAAVNSILMTPVTNI
SSPAPTAQATTSTKKKPTKNKVITGYILYSREVRKQVVQNNPESKFGDISRIVGSEWKAL
ATTEKQVWEERASKLNEESKAQVLAEQEEHMVFECKWEECDYQFEELSDCVEHSVKDSKD
SQGHVQKYYQDHPGEELQCKWRNCSRLTKKNLQPFPNITRLIRHVRDMHINKGNGRSIPP
DSRSKNFKPSSKVAALSRLSTTSSVTPSVAAAVSAASASTFITTPVNYTSVIVAAPASSS
TVAAAAAQKTADPMFISVPPRPQRVLHSEAYIKYIEGLSADQKHITNWERTLHATPETCA
PPDPEKLAHVTTWLGKRADQHDNVVAALWQLRNQLLKDTLGLHKTL
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacgtagaagaaccagctctatagctggacgtcatgatgatgatgatagtgag
gcctccaccagtagtggccctacaatgaggaaacgaagaaagattttcgatcctattgag
gcttgtcaccaattgtacgagacgataagaggtcacaaaaaaaacgacggcagcctttta
tgtgactctttcatcagagtgccaaaaagacgccaagaaccagggtattatgacgttgta
agtaaccccatagacttgctgaaagtccaacagaaactcaaaactgatgaatataacgat
attcatgacttagaaggtgatatagaattaattgtaaataatacaaaggcattttataag
aagagtacacaagagtggaaggatgccgatgaattgtggaacctgtttctaactacgaaa
attaaattgttaaatccggacgatgatagtaaagcagagtcgaaatctgaaattaaaaat
ccaaatcatacaccaaagccagtccggatgccagttcgacgaggaaatagttcagttaaa
aacaactcgaatcacaataatagtcttaataattcaaattcgctcacttcggtgaatagt
aaagatgatcctcaacagtatgaagaactgttcaatgtggtgatgaccgccacagacgat
aataaaaaactgcttaatactcacttccagttattgccctcaaagtcgaagtatccggaa
tattatgaagtcatagaacagccgatagaccttaagaggatagccattaaaattcaaaac
aaccaatacccaaatctactgacgctagaaaaggatctagttgtaatgtgcaagaatgcc
tgtctattcaatgaaccgaattcgcaaatatacaaccacgccaaacaactaaaaaagatc
atcaaccaaaagcggatagaaataatggaacagtggtcaaaaccttcgtctcccagtaat
acgagtaagtcgggcgagaggctgaagccgagaaagtctcgcaactacattgcggctctg
gctcagaagaatcaggaggaatccgatccggattctgaagttgattccgaacctgagcca
gttcagtcttcgcgacgagatgtggaaagtcccaaactggttgagcttcatcatgatgat
tttgtctgcatggagccagacaatccgcaatggaagctactggaaacagtctggcgatta
gaaggatccaatggccaacctttatcagagcctttttggaaactgccatcgcgacggata
tatccagattattacaaagagattaagaaccctttgtcgcttactcaaattagggccaag
ttaacgaaaaaaggttacggtactgtgagcgaagtagctggcgacatgacaattatgttc
gagaatgccaagaagtataacatacccaattccaaactgtataaggacgccgtgcgatta
caaagagtaatgcaagcgaaagtgcaagaactacttgatatcgatcaggtaacccataag
aaaactaacaaagcaattcgcaagcacatggatgaagatagttcagcgagaaaaaagtcc
ggacaaaaaccgaagaacctcagcccaatgggcacgccgatgcgagggaggcccccaaag
gattttgttcctatgaagaaacgattattcactttggccaaatatatgctggactttacg
tgtgaagatggaagacagccaatgctcggattcatggaaaaaccgtcgaaaaagctctat
ccagaatactatgaagtcatcgacgagcctattgattttttggaaatcgaatcaaaaatc
aaagctgagcagtacagttgcgagaaagatctagtgaaggatttccagttgatgtttgcc
aattgcaggcaatttaacgaggaaaattcccctatatatgaggatgcaaatctgatggag
aaacatttaatgattaaagtggaaccgatgttcaatacggtggaaaagcaacaggaagtg
aaaaatgagcgtgcatcagcccgagtgtataaacccaggaagattttgacgccattggag
aaggcagtgaaacatatgttcgaagctgtgcgagattatagagatccaaagggcgaacga
cttttgtgccagattttcatgaaactgccgtccagaatagaatatcccgattattacgag
gtgataaaacacccaatagacatggaacggatagcgcacaagatgaagaacaatttttat
gagagcgtcgaggatttggccgctgatctaagcttgatgttggataacgcgtgcaaattc
aatgagccggactctcaaatctataaagatgcgctcgtcttgcaacgagttgtatcgcaa
aagcgcctccagctgaaagaattggccgatgacgaagccccagatgtggccgaagccgtt
caagacattcttcttacgctgtttaccactgtatacaatcaccaagacgatgaagggcgg
tgttacagcgattcgatggctgagcttcctgaacacgatgaagtcgacggcaaaaaggtt
cgagcactgtccttagacctgatcaagcggagattggacaaaaacctatacaaacgtctt
gatacttttcaagtggatttttttgcatgcctggacagagcgcgtcgattgtccagatcc
gactcccaagtgtttgaggattccatcgagatgcagatgttcttcattcacgtgagggac
gaactctgcaagcacggagaagtcctacagtcgcctgctttaatctatacgtctttagat
gccagacatgcgattgaaaagctacggcaccaaaagtctatgcaagagtcaattgaagaa
gatagtgagactcgaagttccgatgattcagtgctgaaagatggcagcaacagcaacggc
tctacggaagacacgatgacatgcaatcagaagactttccaagttggggagtatgtttac
ttggattctaaaaaagagggctgtgaaccgcatattatcaagatagagaagttgtacgag
aaaaatggacagcaaatgctctacgggaaccattatctgcgaccagacgaaacatatcac
gttcaaactagaaggtttctggaaaaggaggtttttaagtctgataaatacgtcaacgta
gcgctggaggagattaaggatcgctgttgcgtcctgtcggttaagcaatattttgccatg
gtcccagaaggctacgacgaagctgatgtctacgtgttggagtcccgatacagttcgcgg
catcgagccataaaaaaaatcaaaatattctccgaattagcttccagttacaagctggtc
gagcgcgaggtgccgttggaacccaaacgagtcatgtcggtgttcaaggagagactggag
aagcacaaggacgaactggcggagcttcaagagttggagaggatgatcgatgacgatcga
ccaaacgttgtggcctatgttgccacggaccttgacgatggaaacacctactatgaacaa
tacaatacaatctgttcaggtgtgatcaagaccggggattttgtgtatgtggttgttgac
ggtggcaaacaagttgtggctcaaatcgactccatttgggatacatcagacggcaagtgt
tactttcgcggtccctggttcatctgcccatccgaggtaccaaatctcaccaataagctc
tactacaagaacgagctgttgcagtctaccgaggaggatatcaatcccattgtcagtatt
atagggaagtgtgcggttttagattacaacgactatgtatcattgaggccctcggaaatt
cccgaacaggatgtgttcatttgcacgtcgctgtacgacgaggtgaaccggcaaatccgc
aaactaccacccgaaggcctgaaaaagtactaccatttgactgaggtcgtcgacgacgag
atttactacttcaccaagctgttaaatccctcaaaggtaaacgttagggacgccttgaat
tccaaattgagacagaagcttctggactcgcggaccgcagaggcctcgcctacacttaca
aagttggcggacatcgatatcgtgatggaggattcgttggatggcgggccgccctcagtg
gggtcgggagagataccggccgcggttaacagtatcctcatgacccctgttactaacatt
agtagtccagcgccaaccgcccaagcgactacttccaccaaaaagaagccgactaagaac
aaggtcatcactggttatattctgtattcgcgcgaggtgcgcaagcaagttgttcagaac
aatcccgaatcgaaattcggagacatttcccgcatagttggctcggaatggaaggctctg
gctactacggaaaagcaagtgtgggaagagcgcgcctccaagttgaacgaagaatccaaa
gcgcaagtgcttgctgaacaagaagagcacatggttttcgaatgcaaatgggaggagtgc
gactaccagtttgaagaactgagcgactgcgtagagcactcggtcaaagactccaaagac
tcgcagggacatgtccaaaagtactaccaggaccatcctggagaagagcttcagtgtaag
tggcgcaactgttcgcgtttgaccaagaaaaatctgcagccgttcccgaacatcacgcgg
ctcattcggcacgttcgggacatgcacatcaataagggcaatggacgaagtatcccaccg
gacagtaggagcaagaatttcaagccttctagtaaagtggcggctcttagccgcttgtct
accacttcatccgtcacgcctagtgttgcagcagctgtatctgctgctagtgctagtaca
ttcataaccaccccagtgaattatacatctgtaattgtggcagcccctgcgtcaagctct
acagttgctgcggccgctgcgcaaaagactgccgatcccatgttcatttcggtccctccc
cgaccgcaaagagttctacattctgaagcctacattaaatacatcgagggtttgagtgcg
gaccaaaagcacataacgaattgggagcgcactttgcacgcaacacccgaaacatgtgcg
ccccctgatccggaaaaactggcccatgttaccacttggttggggaaacgggctgatcaa
cacgataacgtggtggcggctctttggcaactcagaaaccagctgctgaaagacactttg
ggcctacacaagactttgtaa
DBGET
integrated database retrieval system
