Dendroctonus ponderosae (mountain pine beetle): 109536616
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Entry
109536616 CDS
T04899
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109536616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpa03009
]
109536616
Ribosome biogenesis [BR:
dpa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
109536616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Utp13
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_Vps41
WD40_like
Beta-prop_Nup120_160
Ge1_WD40
Beta-prop_IFT140_2nd
Vgb_lyase
Iron_permease
YokU
Motif
Other DBs
NCBI-GeneID:
109536616
NCBI-ProteinID:
XP_019758461
UniProt:
N6UH34
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MSNPIKLKEAFEVESKHSAFYTGGNIQWIEDTLYCQTASAINLLDVETGSVTKSIGNGSE
SEEVDSINTFTTDGTQFVTSHESGLLKLWSLEGTVEKMWKSIHKGPIAKLSLNGSRLASG
GSDGRVRIWDLQHQACLLALKCQQGVVNVVENHPHEDEIFASADDGVIDCFELSKGQLKT
KYEGHFSKVTSIAFSHNKENFVSCGRDKVIILWQFNKSTALKAIAVNEAIEVIVSLPQKF
TVPGFKGNSDGVYVASVGENGIIRVWDVINAKTVYTQTNSLVSKAAEEGGLSITHLMLNE
KSKSLAVVSVDHNIAIHHLKSFTCLKQFVGFSDDILDIAIFGQDDSHIVVATNSNDIKLY
ENTSMSCQLLKGHEDFVLSLAVSPLNPNLMVSAGKDNSVRLWQMENAEVKCIGVGKRHTH
SIKSVCFFPKSKLFVSASDDTCLKVWEIPQAKKNIELNGKTTINCKHTVIAHEKEINCVT
VSPNDMLVATASQDKTVKLWKSERLEIMGVLKGHKRGVWSAKFSPVDQVIVTSSADCTIR
LWSVANLTCLKTLEGHDSSVIKADFLSKGLQVISVGADGLIKLFNLKNSECQCTLEQHDA
TIWALAIKSNESGFITGGSDSQLIKWKDVTMDRKEQKLKELEEVAVEEQKLSNYIQSDQL
LKALKLSLKLEKPMQSLKIVQGILKKGDEGLPDVVKSLRNDQKESLMNFALNWNMNSRNT
HAAQLVLNILLKEMQTSEFRPVGLSKLTEQALPYTERHFKRVSKLMQDANLITYTLNCMQ
PHARSIGE
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatcctattaagcttaaagaagcttttgaagtagagtccaaacatagtgccttc
tacaccggcggcaacattcaatggattgaagacactttatactgccaaacggcttccgcc
atcaacctcctcgatgtggaaacgggctccgtcacgaaaagcattggaaatggaagcgaa
tctgaagaggttgactcaattaataccttcactactgatgggactcagtttgtaacttcc
cacgaaagtggactgttgaaactatggagcctagaggggacagtggaaaaaatgtggaaa
tccatccacaaagggccaattgccaagctcagcctcaatggaagcaggctggcctctggt
ggatcggatggcagagttcgcatatgggatttacaacatcaagcttgtcttttagctcta
aaatgccagcaaggtgtcgtaaatgttgttgagaaccatcctcatgaagacgaaattttc
gcctctgcagatgatggggtgatcgactgcttcgaattatctaaaggacaactgaaaacc
aaatacgagggccacttcagcaaagtcacctcaatcgccttttcacataacaaggagaat
ttcgtctcttgcggccgagataaggtgatcatcttgtggcaattcaataaaagtaccgca
ctcaaagccattgcagtgaacgaggcaattgaagtaattgttagtctgccccagaagttt
actgtgcctggttttaagggcaactctgatggggtttatgttgcctcagttggagaaaat
ggtattatccgagtatgggatgttatcaacgccaaaactgtttacacgcaaacaaactca
ctagtatcaaaagcggctgaagaaggcggcttgtccatcacgcatctgatgttgaatgag
aagtcaaagagcttagctgtagtcagtgtggatcataacatagcaatccatcatttgaaa
tcctttacgtgtttaaagcagtttgttggtttctccgacgacattctggacatagccatt
ttcggccaagacgatagccatatagtagtggccacgaactcaaacgatataaagttgtat
gagaacacatccatgagttgccagctgctaaaggggcatgaggactttgtcctttcgttg
gctgttagtccgttgaaccccaacttaatggtatcggctggcaaagataacagcgtgcgt
ctttggcaaatggagaacgcggaagtcaagtgtatcggcgtcggaaaacgacatacccat
tcaataaaatcggtctgcttctttccaaagagtaaactttttgtgtcggcaagcgacgac
acgtgcctgaaggtttgggaaataccgcaggcaaagaaaaatatagaattaaacggcaaa
acaaccatcaactgcaaacacacggttattgcacatgaaaaggaaataaactgcgtgact
gtgagcccgaatgacatgctcgttgcaaccgcatctcaggacaaaactgtgaaactgtgg
aagagcgaaagactcgaaataatgggagttttgaagggtcacaaacgaggagtatggagc
gcaaagttttctcctgtggaccaggtcattgtcacctcttcggctgattgcacgattaga
ctttggtctgtagcgaatctgacctgcttgaaaaccttggaagggcacgattccagcgtg
ataaaagccgactttttatctaagggattgcaagtgattagtgtgggagccgacggactt
atcaagctctttaacttgaagaactcagaatgccaatgtactttagagcagcatgatgcc
acgatctgggccttggccattaaaagcaacgagtccggttttataactggcggcagtgat
tcacagttgatcaagtggaaagatgtcacaatggatagaaaagagcagaagctaaaagaa
ctggaggaagtggctgtggaggagcagaagctgagcaactacatacaaagcgatcagctg
ctgaaagcccttaaactgtcgctgaagctggaaaagccgatgcaatctttgaagatcgtc
caaggaattttgaagaagggagatgaaggattgccggatgtagtaaaatcgcttagaaat
gatcaaaaagaaagcctgatgaatttcgccttaaactggaacatgaacagcagaaacacc
catgcagctcaattggtgctgaacattttgctaaaggaaatgcagaccagcgagtttagg
cctgtaggtttaagcaaactcactgaacaagcgctgccgtatacggaacggcattttaaa
agagttagtaaactaatgcaagatgctaatttgattacgtacacccttaactgtatgcag
cctcatgcgcgaagtattggcgaatga
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