Dendroctonus ponderosae (mountain pine beetle): 109536679
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Entry
109536679 CDS
T04899
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpa03021
]
109536679
03036 Chromosome and associated proteins [BR:
dpa03036
]
109536679
Transcription machinery [BR:
dpa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
109536679
Chromosome and associated proteins [BR:
dpa03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
109536679
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
SH2
Tex_central_region
S1
HHH_9
Spt6_S1
Tex_YqgF
HHH_3
Tex_N
S1_RRP5
DUF2924
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
109536679
NCBI-ProteinID:
XP_019758553
UniProt:
A0AAR5PBW5
LinkDB
All DBs
Position
Unknown
AA seq
1699 aa
AA seq
DB search
MADFIESEAEESSEEELEPHERKKPKKVKAMDDSSEEEEDDDERLREELKDLIDDNPIEE
SDGEDSDASRGQKRKKSDDEDLDDRLEDEDYDLLEENLGVKVERRPKFKRLKKMQDEESD
GEEENDAEQDREQIANDLFSEDDDERHSERSHRPAAEPEHFGEEEDEGDYSDADDFIVDD
DGKPIAKKKKKPIFSDAALQEAQETFGVDFDYDEFSKYDDEYDEEEEDEEDEYEEDEEGE
RRRRQKKAAKKRPTKKSIFEIYEPSELKRGFFTDLDNEIRSTDIPERLQLRDVPLSAVPD
DSSELDDESEWIYKQAFCRSTVSNIDANLTQEARDKQRKGPQTVGKIRKALDFMRNQQLE
VPFIAFYRKEYVQPELNINDLWKVYRYDAKWCQLKGRKENLLNLLEKMRSYQMDQIMQDP
DAPIPDNVRLLKESDIEYLRNVQTAEELNDVHNHFILYYAQDLPAMHAAWKVKEKERKKQ
DRRQARLKALAEAEDGGAETVEDFPDDEQNNDPEPETIRYANRSGSYALCIKAGLNSLAK
RFGLSPEHFAENLRDNYQRHEVDQELTEPAELAKEYICPKFQTVEEVLQAVKYMVALQIA
REPLVRKCVREVFYERAKISVAPTRKGQKVIDESHNCYALKYIKNKPVRDLTGDQFLKLT
LAEEELLVKIKISDNIEGHTSNSYFDEVKQLYIRDEFSKNVQEWNKVRAECVERALLRCV
IPDLQSEIKLVLVNEAKEFVLKACCRKLYNWIKISPYQVEFPEEDEDEWNTSKGIRVMGL
AYEPDYSQSAFTCISAPDGDITDYLRLPHILKRKNSWRQEEKLLKEADLMALRNFIYSKK
PHVIAIGGESREALMIAEDLRGVVQELVESEQFPTIKVEIIDNELAKVYANSNKGVADFR
DYPELLRQAISLARKMQDPLIEYSQLCNSDEEILSLRFHPLQEQITKEELLEALCLEFVN
RTNEVGVDVNLAVQQVHKSHLIQFICGLGPRKGQALLRVLKQTNQRLENRTQLVTACHMG
PKVFINCSGFIKIDTNSLGDSTEAYVEILDGSRVHPETYEWARKMAVDALEYDDDEGANP
AGALEAILVTPERLKDLDLDAFAEELERQGFGNKSITLYDIRAELNSRYKDLRTAYRPAN
SEELFDMLTKESPDTFYIGKMVQASVIGIARRKPQGEQLDSANPVRNDETGLWQCPFCLK
NDFPELSDVWNHFDAGSCPGQATGVKLRLDNGISGYIYIKNLSDKTVSNPEERVGIGQLI
HCRIIKIDVERFSVDCTSKSSDLLDKNHEWRPPRDPYYDQDQEDKDNRMEAEKKKDKQKQ
TYIKRVIVHPAFHNISYTEAEKCMADMDQGEVIVRPSSKGVDHLTITWKVGDGIYQHIDV
KEQGKTNAFSLGKSLWIGNEEFEDLDEIIARHVNPMASYARDMLYFRYYKDTNGGLKDKA
EDYIKDEKKKNPAKIHYIVSAAKNYPGKFMLSYLPRSKVKHEYVTVTPEGFRFRQQMFDS
VSSLFKWFKEHFRDPIPGGTPSTPRMSGSSGRTPYQGTASTPFNSMNAETIQRVAQNLPS
HMLQSLSAVANQTPHYPHTPGGAYGANYLNTPYTPSGQTPFMTPYQTPHTQQTPRYGQST
PSPMQSVPPGTFLHPGSVTPASQSSPFSRMSHHRSAPGHGLPSRNSVTSSSYRSGGYSHS
EQMDWQKAAEAWAARSRGE
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
atggccgactttattgaatccgaagcagaggaaagtagtgaggaagagctggagccccat
gagcgcaaaaagccgaaaaaagttaaagcaatggacgatagttctgaagaagaagaagat
gacgatgaaagactaagagaggaattaaaagatctaattgatgataacccaattgaggaa
agtgatggtgaagactctgatgcatcacgtggtcagaaaagaaagaaatccgatgatgaa
gatcttgatgatcgtttagaggatgaagattacgatttgcttgaggaaaatttaggtgtc
aaagtggagagacgccccaaattcaagagactgaagaagatgcaggatgaagaaagtgac
ggagaagaagagaacgatgctgaacaagatagagagcaaatagcgaatgatcttttttca
gaagatgatgacgaaagacattcagaacgtagccatcggcctgctgccgaacctgaacat
tttggggaggaagaggatgagggcgactattcagacgctgatgattttattgttgacgat
gatgggaagcctatagcaaaaaagaagaagaaaccaatcttttccgacgccgcgctgcag
gaggcccaagaaacatttggagtcgatttcgattatgacgaattctctaaatatgatgat
gagtacgatgaagaggaggaggacgaagaagacgaatatgaagaagatgaagaaggcgag
agaagacgtcgtcagaagaaagcagccaagaagcggccaacaaaaaagtcaatctttgaa
atttacgaaccttcagaactgaaaagagggtttttcaccgatttggacaatgaaattcga
agcacagatataccagaaaggttgcagctacgcgacgtacctctttcagctgtcccagac
gattcctccgaactagacgacgaatcggagtggatttacaaacaagccttttgcaggagc
accgtatctaatatagatgccaatcttacacaggaagcacgagataaacagcgcaagggc
cctcagacagttggaaaaattcggaaagctttagactttatgcgaaaccaacaactggaa
gtgccgtttattgctttctatagaaaagagtatgttcagcctgaattgaacatcaacgac
ttgtggaaggtgtacaggtacgacgcgaaatggtgccaattgaaaggccggaaagaaaat
ctactcaatctactggagaaaatgagatcgtaccaaatggaccagattatgcaagacccg
gatgcacctatacccgataatgtcaggttgctgaaagagtctgatattgagtatctgaga
aacgtgcaaactgctgaagagcttaacgacgttcacaatcacttcatactgtattatgcg
caggatttaccagcgatgcacgccgcctggaaggtcaaagaaaaggaaagaaaaaaacag
gataggcgtcaagccagattgaaagcactagctgaagctgaagatggaggcgctgagacc
gtcgaagactttccggacgatgagcagaacaacgatccagagccggaaactatcagatat
gcaaatcgatcaggatcatatgcactgtgcataaaagcaggactgaattcgttagctaaa
agatttggtttatctccggaacattttgctgaaaatcttcgcgacaattatcagcgacac
gaggtcgatcaagagttaactgagcctgctgaattagccaaagaatatatttgccccaag
tttcagacagttgaggaggttttacaagctgtcaaatacatggtagcactccaaatagcc
cgtgagccgcttgtacgcaaatgtgtgcgtgaagtattctacgaaagagccaaaatcagc
gtagctccaaccagaaaaggtcaaaaagttatcgacgaatcgcacaattgctatgcctta
aagtatataaagaataagccggtcagagacctaacaggagatcagtttctaaagttaaca
cttgcggaagaagaactgttggtgaagattaagatcagcgacaacattgaaggccacact
tctaattcatactttgatgaagtgaagcagctgtacatccgtgacgaattcagcaaaaac
gtccaggaatggaataaagtgcgtgctgaatgtgttgaaagagcgctgctgcgttgcgta
attcccgatttgcagtcggaaatcaagcttgtgcttgtgaatgaagctaaggaattcgtc
ttgaaggcttgctgtcgcaaactgtacaactggataaaaatatcgccttatcaggtcgaa
ttccccgaggaggacgaagacgagtggaacaccagcaaaggtattagagtgatgggttta
gcgtatgaaccggattattcgcaatctgcatttacttgtatctcagcgcctgatggtgat
ataactgattacctgcggctgccgcacattttaaagagaaagaacagctggaggcaggag
gaaaagttactgaaagaagccgatttgatggctctacggaactttatttattcgaaaaaa
ccgcacgtcatagcgattggaggagaatcgcgtgaagccctaatgatcgcagaggactta
cgaggcgttgtgcaagaactggtcgaatctgaacaatttcccactattaaagtggaaatt
attgacaatgagttagccaaagtatatgcaaattcgaataaaggagtcgcggatttccgg
gactacccagagttactaaggcaagccatatctttggctaggaaaatgcaggatccgctg
atcgaatactcacaactgtgcaacagcgatgaggaaattctcagtttacggtttcaccct
ttgcaggagcaaatcacaaaagaggagctcctggaagcattgtgcttggaatttgttaac
cgtaccaatgaagtgggagtagacgtcaatctcgccgttcagcaagtgcacaagagccac
ctgattcagttcatttgcggtctggggccgagaaaaggccaagctttactgagggtactg
aagcagacgaatcaacggctagaaaacagaacgcaattggtgaccgcgtgccacatgggt
cccaaagttttcattaattgttctggctttattaagatcgacacgaacagtctaggcgac
agcaccgaggcgtacgtcgaaattctcgacggctccagagtgcatcccgaaacatatgaa
tgggcacgtaaaatggctgtcgatgctctggagtatgacgatgatgaaggggcgaatcca
gccggagctttggaggcaattctagtgacgcccgaacggctaaaggatctcgatttggac
gcgttcgctgaggagctggaacgtcaaggatttggcaataaaagcattactttgtacgat
attcgggccgagttgaacagccgctacaaggatctgcgaacggcttatcgtcccgccaat
tcggaggagctgtttgacatgctcaccaaagaatcgccagatactttctatattggaaaa
atggtccaggctagtgttattggtattgcccgcaggaaaccacaaggtgaacaactggac
tccgccaatcctgttcgtaacgatgaaactggattgtggcaatgtcctttctgcttgaaa
aatgactttcctgaattgtccgatgtgtggaaccatttcgatgctggctcctgtcccgga
caggccacaggagtaaaactgcgactagacaatggcatttctggctacatttatattaag
aatttgagtgataaaactgtgtcgaacccagaggaacgggtcggcatcggtcagctgata
cactgccgaataatcaagattgatgtcgaacggttctcggttgactgcacgtcgaagtcg
agcgatttgctagataaaaaccacgaatggaggcccccgagagatccgtattacgatcaa
gatcaagaagacaaagacaatagaatggaagccgaaaagaaaaaggacaaacagaagcaa
acttacattaaacgtgtgatcgttcatcctgcttttcataacatttcctatacggaagca
gaaaagtgcatggccgacatggaccaaggagaagtaatagtcagaccatcgagcaaaggg
gttgatcatcttaccattacctggaaggtcggagatgggatttaccaacatatcgatgtg
aaagagcaagggaaaacgaacgccttttcgctgggaaagtccctttggattggcaatgag
gagtttgaagatctagatgagattattgctcgtcacgttaatcccatggcgtcttatgcc
agggatatgctttatttcaggtattacaaggacactaatgggggtctgaaggataaagct
gaagactacatcaaagacgagaagaaaaaaaacccggccaaaattcactacattgtgagc
gcggcgaaaaactaccctggcaagtttatgttgtcctatttgcccagatctaaagtgaaa
catgaatatgtcaccgtcactcccgaaggcttccgcttcagacaacaaatgttcgattct
gtctcatcgctgttcaaatggtttaaagagcattttagggatccgattccaggtggaacc
cccagcacccctcgaatgagtggctctagtggacgcactccctatcaaggtactgctagc
acaccgttcaatagcatgaacgcagaaaccattcaacgggtcgcccagaatttgcccagt
cacatgttacaaagtttgtcagctgtggccaatcaaactcctcactacccgcataccccc
ggtggagcttatggggccaattacctgaacaccccgtacactcccagcggacagacacca
tttatgaccccctaccagactccccatacacaacagacaccgagatatggtcaatcgaca
ccatcgccgatgcaatcggtgcctcccggaacattcctgcatccgggttcagttacccca
gctagtcaaagtagtccgttttcccgtatgagccaccaccgaagcgccccggggcacgga
ttaccatccaggaactcggtcacatcaagttcctatcggtcgggcggatacagtcattcg
gaacagatggattggcagaaagctgctgaagcgtgggccgcaagaagtagaggtgagtag
DBGET
integrated database retrieval system
