Dendroctonus ponderosae (mountain pine beetle): 109536798
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Entry
109536798 CDS
T04899
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03030
DNA replication
dpa03410
Base excision repair
dpa03420
Nucleotide excision repair
dpa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109536798
03410 Base excision repair
109536798
03420 Nucleotide excision repair
109536798
03430 Mismatch repair
109536798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpa03032
]
109536798
03036 Chromosome and associated proteins [BR:
dpa03036
]
109536798
03400 DNA repair and recombination proteins [BR:
dpa03400
]
109536798
DNA replication proteins [BR:
dpa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109536798
DNA Replication Termination Factors
ELG1-RFC complex
109536798
Chromosome and associated proteins [BR:
dpa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
109536798
DNA repair and recombination proteins [BR:
dpa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109536798
Check point factors
HRAD17(Rad24)-RFC complex
109536798
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rep_fac_C
Rad17
AAA_assoc_2
AAA_22
Mg_chelatase
AAA_24
AAA_16
AAA_11
DEAD
DUF815
AAA_19
RuvB_N
Gp44_lid
AAA_30
ResIII
bpMoxR
SLFN-g3_helicase
AAA_5
AAA_7
Daxx
Tfb5
Motif
Other DBs
NCBI-GeneID:
109536798
NCBI-ProteinID:
XP_019758746
UniProt:
N6TBZ7
LinkDB
All DBs
Position
Unknown
AA seq
378 aa
AA seq
DB search
MHSFLKSGKLGEAGSSNSPTSGSAKKRLKKLQWVEKYRPKTVEDVVEQKDVVAVLKECIS
GADLPNMLFYGPPGTGKTSTILAAAHQLFGDLYKDRILELNASDERGIQVIRDKIKTFSQ
LTVCSARADGNPCPALKIIILDEADAMTQAAQAALRRTMEKETKTTRFCLLCNYVSRIIE
PLTSRCTKFRFKPLNQSFILERLQAICKQEKVLVAENILNVLVQESGGDMRRAITALQSC
ANLQGKNSHITLENVYEVLTVVPEKWVANFLDLCRKPTDIKQIIQFINELEQQAYPTHKI
FEQLNVLLIESDTISEPLKAEIGEYLAESSFRSTCSRADFTHLLDFAVHTQEILTVDPEA
RKWEQQENAKCTTIQGLV
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcattcgtttttaaaatctggaaaacttggagaagccggtagcagtaattcccccact
tctggcagtgcaaagaagaggcttaagaaattacaatgggtggaaaaatacaggcccaaa
accgtggaggatgttgtagaacaaaaagacgtggtggctgtattaaaagaatgtatctcg
ggggctgatttgcccaatatgttgttttatggccctcctggaacgggaaagactagcact
attttagcagcagcacatcagctgtttggagatttatacaaagatagaattttagagctt
aacgcctcagatgaaagaggtatacaagtaataagggataaaatcaagaccttctcccag
ttaacagtatgcagtgcaagagcagatggcaacccatgcccagctttaaagataattatt
cttgatgaggctgatgccatgacgcaagctgcccaggcagcgttgaggcgcactatggaa
aaagaaaccaaaaccacaagattttgccttttgtgcaactatgtttcgaggatcattgaa
cctctcacttccaggtgcacaaaatttcgttttaagcctttaaatcagtctttcatcttg
gagagattgcaagctatttgcaagcaagagaaggtcctggtagctgagaatatactgaat
gttttggtgcaagaaagtgggggagacatgagaagggctatcactgccctgcaaagttgt
gcaaatctgcaaggaaaaaacagtcacatcactttggaaaacgtttacgaggttctcaca
gtagtcccggaaaagtgggttgcaaacttcttggatttatgtagaaagcccacagacatc
aagcaaattattcaatttatcaacgagttggaacaacaagcttatcccactcataaaata
tttgaacagctaaacgtcttgctgattgaatcggatacaataagcgaaccgctcaaggca
gaaataggcgaataccttgctgagtccagtttccgcagtacatgcagtagggcggacttc
acccacttgttagattttgctgttcacactcaagaaattcttacagtggatccagaagcg
agaaagtgggaacaacaggaaaatgccaagtgtacaaccatccaaggtcttgtgtaa
DBGET
integrated database retrieval system
