KEGG   Dendroctonus ponderosae (mountain pine beetle): 109537296
Entry
109537296         CDS       T04899                                 
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
dpa  Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dpa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    109537296
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpa03019]
    109537296
Messenger RNA biogenesis [BR:dpa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     109537296
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st CSTF1_dimer Beta-prop_EML_2 WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_TEP1_C WDR90_beta-prop_4th WD40_RFWD3 NBCH_WD40 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_VPS8 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Ge1_WD40 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_IFT122_1st eIF2A Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_WDR75_2nd Beta-prop_WDR41
Other DBs
NCBI-GeneID: 109537296
NCBI-ProteinID: XP_019759490
UniProt: J3JVU0
LinkDB
Position
Unknown
AA seq 441 aa
MTNSSNMFLSEDDPDPNNLIKSREFLYRLIISQLFYDGHQQLGQSLAQAVQAEPACAPSD
RLFRITLAGLEHEPDRKSRPPTIGIGNNTIGPGLDLEFETDSSTLAPEPALYETAYVTSH
KGNCRAGCFSADGQLIATGSVDASIKILDVDRMLAKSAPDELDPSRAIEQQGHPVIRTLY
DHMEEVTCLEFHPKETILCSGSKDHSIKLFDISKASVKKAFKTISEAEPVKWFSFHPSGD
HLIVATTHPVIRMYDVNTLQCYVCPFPNQQHTQTVTYLKWSPDAKCFASCSKDGTVKIWD
GVSNRCVNTFVKAHDGFEVCSVSFSRNGKYLLSSGKNSICKLWELSTSRCLIAYTGAGTT
GKQEYEAQAVFNHTEDYVLFPDEATTSLCAWNSRNASRKQLMSLGHNGAVRLIAHSPSQA
AFLTCSDDFRARFWYRRTPTL
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgaccaactctagcaacatgtttctaagcgaagacgacccagatccgaacaatctgatt
aaaagtcgagaatttttgtacagactgatcataagccagctgttttatgatggccatcag
cagcttggacaaagtctggctcaagcagtgcaagcagagcctgcctgtgctccaagcgac
aggttatttaggataacattagctgggttggaacatgaacccgacaggaaaagcagaccg
ccaactattggaatcggaaataataccattggaccagggcttgatttggaatttgaaacg
gactctagcacacttgcgccagaaccagcgctttatgaaacggcttacgttacttcacat
aagggtaactgcagggctggttgcttctctgcagacgggcaactaattgcaactggaagt
gtggatgccagcatcaaaatcctagatgtagacagaatgttggcgaaatcagcccctgat
gaattggacccatccagggccattgagcaacaaggacacccagttatcagaacattgtat
gaccatatggaggaagtcacctgcctagaatttcacccaaaggaaacaatactctgttca
ggatcgaaagaccacagcatcaagttgtttgatatatctaaggccagtgtgaagaaggca
ttcaaaaccatatcggaagctgaaccggttaaatggttctcatttcaccccagtggagat
cacttaatcgttgctacaacccatccagtaatccgaatgtatgatgtgaatactctgcaa
tgttatgtctgcccttttcccaatcaacaacacactcaaacagtcacttatcttaaatgg
tctcctgatgcaaagtgcttcgccagttgcagcaaggatggaaccgtcaagatatgggat
ggagtttcaaatagatgtgttaatacctttgtaaaagctcatgatggttttgaagtatgc
tcagtgtctttttcacgcaacggcaaatatctgctatcgtctggaaaaaattcaatatgt
aagctgtgggaactctcgaccagtcggtgcctgattgcctacactggagcaggcacaact
gggaaacaggaatatgaggctcaagcagtgtttaatcatactgaagactatgtgctattc
cctgacgaagcgaccacatccctatgcgcttggaattccaggaatgcatccaggaagcaa
ctgatgtctttagggcataatggagcagttagactgatcgcccattcgcccagtcaggct
gcattcttgacttgttctgatgatttccgcgctagattttggtatagaagaaccccaaca
ttgtaa

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